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SCN18_25_1_16_R2_B_scaffold_231_8

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(11900..12790)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZQ5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 295.0
  • Bit_score: 307
  • Evalue 1.10e-80
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGY01256.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 295.0
  • Bit_score: 307
  • Evalue 1.50e-80
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 301.0
  • Bit_score: 243
  • Evalue 7.20e-62

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGAAATGCACCAGATACGCTATTTCCTCAAAGCGGGGGAAACGCTGAATTTCACGCGGGCGGCGGAGCAGTGCGGCGTGAGCGTGCCCTCGCTCAGCCGCGCGATCCGGCATCTGGAAGAAGAACTGGGCGGACAGCTTTTCCGGCGCGAGCGGCATCTGACACATCTGACGGACCTCGGCCGGCTGATGTTCGAACATTTCTCCGTCATGAGCCGTGCGGCCGAAGCCGCCAAACGCGAGGCTCGGGATTATACGAGGCTCGCGGGTTCTCGGCTCAAGCTAGGTATATTCGCATCGATCGGAGCAAGCGTGCTGACCGGCTACCTCGTAGCCCTGCGCGATCAGGCGCCTGAGCTCGAACTCCACGTCTGGGAGGCCAATTGCGAAGAGCTGGAAGACGCGCTGCTTGGCGGCGAGATCGACATTGCTCTGACCAGCTCGCCTGAGGTCGACAAGCGAATCCGTATGGTGCCTTTGTTTCGCGAGGCATTCTACATTTCCTTTGCTCCGGGCCACCGCTTCGGCGCGATGAATGCGGTGCCTATGTGCGAGCTCGAGGGCGAGAATTACGTTAAACGCCTGCATTGCGAATTTCCTTCGAACCTTGCACGGCTCGGCATTCCCAAGCCCTACGATGCGGTCAATGTCCGCTATGTCGGTGAGCGCGAGGACTGGATCCAGTCGCTGGTTCGGGCGGGCCTCGGTTGCGCCGTGATGCCTGAAAACCTGCCATTGCTGCCGGGGCTCGAAATGCGCCCGCTGGTCGATCCGGAAGTGTTTCGGCAGATCAGCCTGACGACGGTCGCCGGCCGGCCGCACAGTCCGGCTGTGGCAGCGGCGGTTGCGGCCGCGCAGCACTATCGTTGGCCGGGCGGAGCCGCTGGCTAG
PROTEIN sequence
Length: 297
MEMHQIRYFLKAGETLNFTRAAEQCGVSVPSLSRAIRHLEEELGGQLFRRERHLTHLTDLGRLMFEHFSVMSRAAEAAKREARDYTRLAGSRLKLGIFASIGASVLTGYLVALRDQAPELELHVWEANCEELEDALLGGEIDIALTSSPEVDKRIRMVPLFREAFYISFAPGHRFGAMNAVPMCELEGENYVKRLHCEFPSNLARLGIPKPYDAVNVRYVGEREDWIQSLVRAGLGCAVMPENLPLLPGLEMRPLVDPEVFRQISLTTVAGRPHSPAVAAAVAAAQHYRWPGGAAG*