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SCN18_25_1_16_R2_B_scaffold_243_11

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 10437..11378

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DF5_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 306.0
  • Bit_score: 254
  • Evalue 8.90e-65
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KIG03643.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 307.0
  • Bit_score: 255
  • Evalue 7.40e-65
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 306.0
  • Bit_score: 254
  • Evalue 2.50e-65

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Taxonomy

Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGGATCCGATGCCCAATCTGGAAGGACGCTTGCGCCTGCGCCAATTGAAGCTGGTCGCAGCCATCGGCGAACAGGGAACGCTGCGCAGGGCTGCCGGCAGCATCAACATCACGCAACCGACCGCGACCAAAATGCTTGCGGAGATCGAGGAAATTGTCGGTAGCAAGATGTATGAGCGTGGTCCGCGTGGGCTTACCGCCAATCCACTGGGGCGCGAATTGCTGTCCTTTGCCTTGCGCGTGCTGGTCGAATTCGAACGGCTCGGCGGCGCACTAAAAGCCCGTCAAAACGGATCGGTCGGCGAACTCGTCGTCGGCACCATTCTGGGAACGACCGCCGACGTCGTCGCGCGAGCCGTCGTTGCGATGAAGGAAGAGCGTCCACGCCTCACCATCAGGCTGCGAGGTGAAACCAGCGACAATGTGCTGTCGCTGATGGAGGCCCGGCGCGTGGACCTGGCGGTGGGCCGCTTCTTTGAAACGCAGCGACACGCGATTTTCGACTACGAGCACCTCGGCGAGGAGGAGCTTTGCCTTGTGGTGCGTCCGGAGCATCCGCTGTCACGGAAAAGGAAACTGTCGCTCACCGAACTGGCCGACGAACGCTGGATCATGCATGCAGCGTCGAACCCCGCGCGTCAGGTCCTCGAAGCCGAGTTCGGTCGCGCCGGACTCTCGCAACCTTCCGACGTTATCGAAACCAACTCCATCCTCACCGCTCTGCAAATCCTGGAGCTCTGCGATACGGTGGCCATGCTGTCGCAGTCGCTGGTACGTGACCATCTCGCGCGCGGCCTGCTGCGGCGCTTGCCGGTGGCGATGGAGGCACGGATCGGCGGCTTCGGCCTGCTGACACGCCGGGGCGAGCCCCTGAGCGAACCGGCAGAGAATTTCGCCGCGCGTATCCGCGTCCTGGCGCGGAAATTGTCCGCGCGATCGTGA
PROTEIN sequence
Length: 314
MDPMPNLEGRLRLRQLKLVAAIGEQGTLRRAAGSINITQPTATKMLAEIEEIVGSKMYERGPRGLTANPLGRELLSFALRVLVEFERLGGALKARQNGSVGELVVGTILGTTADVVARAVVAMKEERPRLTIRLRGETSDNVLSLMEARRVDLAVGRFFETQRHAIFDYEHLGEEELCLVVRPEHPLSRKRKLSLTELADERWIMHAASNPARQVLEAEFGRAGLSQPSDVIETNSILTALQILELCDTVAMLSQSLVRDHLARGLLRRLPVAMEARIGGFGLLTRRGEPLSEPAENFAARIRVLARKLSARS*