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SCN18_25_1_16_R2_B_scaffold_22_4

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(3020..3568)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DE9819 similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 181.0
  • Bit_score: 331
  • Evalue 3.30e-88
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ERF79863.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 181.0
  • Bit_score: 330
  • Evalue 8.00e-88
FecI-like sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 182.0
  • Bit_score: 326
  • Evalue 4.00e-87

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCTGACGCCGCCTGAACTGGTCTGGCTGATCGCGGCTGTCGCCAAGGGCGACGAGGCTGCTTTCGAGCGCCTCTACGCCGCCACGCGGGCGAAACTCTTCGGCGTGGTGCTCCGTATCTTGCGGCGTCAGGATCTTGCCGAGGAGGTCATTCAGGAGGCCTACGTCAGGATCTGGAGACATGCGGGGCAGTTCAATCCCGGGGTGTCGTCGCCGATCACCTGGATGACATCGATCGCGCGCAACCGTGCGATCGACGTCATCCGCAAGCGCGGCGAAGCGTCGATCGAGGAGGAGCCGACAGCCATGGATGTTGCCGCCGACAATCCCGATCCGCTGGCGCAACGCGAGATGACCGAGGAGTTGAAGCGGCTGCTGGAATGCGTCGGACGGCTCGAGCCGGACCGTCAGAAGCTCGTGCTGCTCGCCTACTACAACGGCTGGAGCCGCGAGCAACTGGCGGAAAAGTTTGCGGCGCCGGTCAACACCGTGAAGACGTGGCTGCGCCGCAGCATGATGGATATCAGGGAGTGCCTCGGGCTGGCGTGA
PROTEIN sequence
Length: 183
MLTPPELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQEAYVRIWRHAGQFNPGVSSPITWMTSIARNRAIDVIRKRGEASIEEEPTAMDVAADNPDPLAQREMTEELKRLLECVGRLEPDRQKLVLLAYYNGWSREQLAEKFAAPVNTVKTWLRRSMMDIRECLGLA*