ggKbase home page

SCN18_25_1_16_R2_B_scaffold_22_28

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 27639..28769

Top 3 Functional Annotations

Value Algorithm Source
carnitine dehydratase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037A12BB similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 362.0
  • Bit_score: 630
  • Evalue 9.40e-178
Carnitine dehydratase {ECO:0000313|EMBL:KJC58667.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 366.0
  • Bit_score: 637
  • Evalue 6.30e-180
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 360.0
  • Bit_score: 618
  • Evalue 1.00e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGCTTCCGCTTGAAGGCCTGACCGTCATCGCCGTCGAACAGGCGGTGGCCGCGCCGTTCTGCAGTTCGCGCCTCGCCGACGCTGGCGCGCACGTCATCAAGATCGAACGGCCCGAAGGCGACTTCGCTCGCGGCTACGATGCCGCAGCCCAAGGCCAGAGCAGCTATTTCGTCTGGCTCAACCGCGGCAAGGATTCCATCGTCATCGACCTGATGACACCGGAAGGCCGCAAGACGCTGGAAGACCTGATCGCAAAAGCCGACGTGTTGATCCAGAACCTCAAGCCGGGCTCCATGGACAAGCTCGGCTTTTCTCGCGAACGGCTGACCAAGGACTATCCGCGGCTGATCTGCTGCACGATCTCGGGCTATGGCGACAGCGGCCCCTATGCCGAGCGCAAGGCCTACGATCTCTTGATCCAGGCCGAAAGCGGACTGGCGTCGATCACCGGCGGCCCTGAAGGAGCGTCGCGCGTCGGCATGTCGATCGTCGATGTAGCGACTGGCGCCACCGCGCACGCCGCGATCCTCGAAGCACTGATCGGACGCGGTAAGACCGGCAAGGGCGCCGACATCCGCATCTCGATGTTCGACGTGATGGCGGACTGGCTGACCGTGCCGCTGCTGAATGCCGAGGACGGCAAACCGCCGCAGCGCATGGGCCTCGCCCACCCCTCGATCGCGCCCTACGGCGTGTTCCGCTCCAAGGACGGCAAGGACATCCTGATCTCGATCCAGAGCGAGCGCGAGTGGAAAAAACTCTGCGCCGAGGTGCTGGGCCAGCCCGATCTGCCGAACGACCCGCGCTTTGCCAACATGGTCGAGCGCGTGCGTAACCGCGCGCTCACCGACAAGGTGGTCGGCGACAGCTTTGGATCGATGACCCGCGACGAACTCCTGAAGCGGCTCGACGACGCCGACATCGCCTTCGCCGAAGTGAACACCATGGCCGACCTCGCCAAGCATCCGCATCTGCGCCGCATTGCCGTGGACACGCCGAACGGCGTGGTCAACTATCCGGCGCCGGCGGCGATCGTGGTCGGTCAGGACAGGCATTACGGCGCTGTGCCGCCGATCGGCACGGTGACGGCGGAAACCGCCACATCTCCAAAAACGGCAAAGTCAAAATGA
PROTEIN sequence
Length: 377
MLPLEGLTVIAVEQAVAAPFCSSRLADAGAHVIKIERPEGDFARGYDAAAQGQSSYFVWLNRGKDSIVIDLMTPEGRKTLEDLIAKADVLIQNLKPGSMDKLGFSRERLTKDYPRLICCTISGYGDSGPYAERKAYDLLIQAESGLASITGGPEGASRVGMSIVDVATGATAHAAILEALIGRGKTGKGADIRISMFDVMADWLTVPLLNAEDGKPPQRMGLAHPSIAPYGVFRSKDGKDILISIQSEREWKKLCAEVLGQPDLPNDPRFANMVERVRNRALTDKVVGDSFGSMTRDELLKRLDDADIAFAEVNTMADLAKHPHLRRIAVDTPNGVVNYPAPAAIVVGQDRHYGAVPPIGTVTAETATSPKTAKSK*