ggKbase home page

SCN18_25_1_16_R2_B_scaffold_296_2

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(1205..1492)

Top 3 Functional Annotations

Value Algorithm Source
transposase IS3 n=1 Tax=Xanthobacteraceae RepID=UPI00035C5D71 similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 85.0
  • Bit_score: 143
  • Evalue 8.80e-32
Insertion element ISR1 uncharacterized 10 kDa protein A3 similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 85.0
  • Bit_score: 141
  • Evalue 7.30e-32
Insertion element ISR1 uncharacterized 10 kDa protein A3 {ECO:0000313|EMBL:CDI12062.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 85.0
  • Bit_score: 141
  • Evalue 3.60e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_65_23 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGAAGGTATCGAATTTTTCAGAGGCGCAGATCGCGTTCGTGCTGAAGCAGGCTCAGGATGGCGCACCGATTGCGGAAGTGTGTCGGAAGGCCGGAATCAGCGACGCGACCTTCTACAATTGGCGCAAGAAGTATCCGGGGCTGATGCCTTCGGAGATGAAGCGGCTGCGACAGCTCGAGAACGAGAACACCAAGCTGAAGCGGATTGTCGCCGACCTGTCGCTGGACCGGGTTCTGTCAAAAAATGTATGGTCCGCCCCGTCGTTGCAAGGGTCAGGTTCGGTCTGA
PROTEIN sequence
Length: 96
MKVSNFSEAQIAFVLKQAQDGAPIAEVCRKAGISDATFYNWRKKYPGLMPSEMKRLRQLENENTKLKRIVADLSLDRVLSKNVWSAPSLQGSGSV*