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SCN18_25_1_16_R2_B_scaffold_1157_11

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 8380..10299

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 638.0
  • Bit_score: 1205
  • Evalue 0.0
Phosphomethylpyrimidine synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNF0_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 638.0
  • Bit_score: 1205
  • Evalue 0.0
thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 643.0
  • Bit_score: 1198
  • Evalue 0.0

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1920
ATGAACATCCGCTCCAATCCGGACACCACCCTTCCCGCAGTCACCACCGGAGGTCTGCGCGCCTCGCGCAAGATCTACGCAACGCCTGACGCCGCGCCCGACCTGCGCGTGCCGCTGCGCGAGATCATCCTGTCGCCGGAGGCGAAGGAGCCCAACCTTCCCGTGTACGACACCTCGGGCCCCTACACCGACCCCGACGTCATCATCGACGTCAACGCCGGCCTCGCCCGCAACCGCATCGCGTGGGTGAAGGAGCGCGGCGGCGTCGAGGAATACGACGGTCGTGTCATCAAGCCGGAGGACAACGGCAACGTCGGCGCCAAGCACGCCGCTGCTGCCTTCAAGGCCCATCATAAGCCGCTGCGCGGCCTCGACGGCCACAAGATCACGCAGCTTGAGTTCGCCCGCGCCGGCATCATCACCAAGGAGATGATCTACGTCGCCGAGCGCGAGAACCTCGGCCGCAAGCAGACGCTGGAGCGCGCGCAGGGCGCACTCGCCGACGGCGAGAGCTTCGGCGCGGACGTGCCGGCCTTCATCACGCCGGAATTCGTCCGCGAGGAGATCGCGCGCGGCCGCGCCATCATTCCAAGCAACATCAACCACGCCGAATTGGAGCCGATGATCATCGGCCGCAATTTCCTGGTGAAGATCAACGCCAATATCGGCAACTCGGCGGTCACCTCATCCGTGGAAGAGGAAGTCGACAAGATGGTGTGGGCGATCCGCTGGGGGGCCGACACCGTGATGGACCTCTCGACGGGGCGCAACATCCACACCACCCGCGAATGGATCCTGCGAAACTCGCCGGTGCCGATCGGGACCGTGCCGATCTATCAGGCGCTGGAAAAGTGCGACGGCGATCCCGTCAAACTGACCTGGGAGCTTTACCGCGACACGCTGGTGGAACAGTGCGAACAGGGCGTGGACTACTTCACCATCCACGCCGGCGTGCGCCTGCCCTACATCCACCTCACCGCCGACCGCGTTACCGGCATCGTCTCGCGTGGCGGCTCGATCATGGCGAAGTGGTGCCTCGCGCACCACAAGGAGAGCTTCCTCTACACGCATTTCGAGGAGATCTGCGACCTCATGCGCAAGTATGACGTCTCGTTCTCGCTCGGCGACGGCCTGCGGCCCGGCTCGATCGCCGACGCCAACGACCGCGCACAGTTCGCCGAACTGGAAACGCTGGGCGAACTGACGCAGATCGCCTGGAAGAAGGGCTGCCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGATCAACATGGACAAGCAGCTCAAGGAGTGCGGCGAGGCGCCGTTCTACACCCTCGGGCCGCTGACGACCGACATCGCGCCGGGCTACGACCACATCACGTCGGGCATCGGTGCCGCCATGATCGGCTGGTTCGGCTGCGCCATGCTGTGCTACGTCACGCCGAAGGAGCATCTCGGCCTGCCGAATCGTGATGATGTGAAAGTCGGCGTCATCACCTACAAGATCGCGGCGCATGCCGCCGATCTCGCCAAGGGCCATCCGGCGGCGCAACTGCGCGACGACGCATTGAGCCGCGCGCGGTTCGACTTCCGCTGGGAGGACCAGTTCAATCTCGGCCTCGATCCGGATACGGCAGTCGCCTTCCACGACGAGACGCTGCCGAAGGAGGCGCACAAGGTGGCGCACTTCTGCTCGATGTGCGGCCCAAAATTCTGCTCGATGAAGATCACGGCCGATGTGCGGGAGTACGCGGCATCCCTCGGCGACAACGAGAAGGCAGCGCTGGGCTTGCAGGCCGGCATGTCGATCAAGGGCACGATCGAGGACGGGATGGCGCAGATGAGCCAGAAGTTCAAGGAGATGGGCGGAAACGTCTATCTCGACGCGGATAAGGTGAAGGAGAGTAATAAGGCGCTGCAATAA
PROTEIN sequence
Length: 640
MNIRSNPDTTLPAVTTGGLRASRKIYATPDAAPDLRVPLREIILSPEAKEPNLPVYDTSGPYTDPDVIIDVNAGLARNRIAWVKERGGVEEYDGRVIKPEDNGNVGAKHAAAAFKAHHKPLRGLDGHKITQLEFARAGIITKEMIYVAERENLGRKQTLERAQGALADGESFGADVPAFITPEFVREEIARGRAIIPSNINHAELEPMIIGRNFLVKINANIGNSAVTSSVEEEVDKMVWAIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCDGDPVKLTWELYRDTLVEQCEQGVDYFTIHAGVRLPYIHLTADRVTGIVSRGGSIMAKWCLAHHKESFLYTHFEEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTQIAWKKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNRDDVKVGVITYKIAAHAADLAKGHPAAQLRDDALSRARFDFRWEDQFNLGLDPDTAVAFHDETLPKEAHKVAHFCSMCGPKFCSMKITADVREYAASLGDNEKAALGLQAGMSIKGTIEDGMAQMSQKFKEMGGNVYLDADKVKESNKALQ*