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SCN18_25_1_16_R2_B_scaffold_152_9

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(6122..6787)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLF9_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 221.0
  • Bit_score: 396
  • Evalue 1.30e-107
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 221.0
  • Bit_score: 396
  • Evalue 3.80e-108
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABE62938.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 221.0
  • Bit_score: 396
  • Evalue 1.90e-107

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Phage_6 → SCNPILOT_SOLID2_TRIM150_Phage_6 → SCNPILOT_SOLID2_TRIM150_Phage_6 → SCNPILOT_SOLID2_TRIM150_Phage_6 → SCNPILOT_SOLID2_TRIM150_Phage_6 → Phage

Sequences

DNA sequence
Length: 666
ATGGGGTCGGACGGTTTCGAGTCCAAGAAATTTGGCGGTCCGGCGGGAAGCGGGGCTGGAGCAAGCAAGCTTGGTCCGAAGGATTTTTCCGGCGCGGTGGATCGCGAGTCCGGGATTGATCCGTTTGCGGGACTGGATGACGCTGCGGCGAACCTTGTCGAGATCAGTGGCGTCATCAAATGGTTTGACGCGTCAAAGGGCTACGGTTTCATCATTCCCGACAATGGCTGGCCCGACGTGCTCCTGCACGTGACGGTTCTCCGCCGCGACGGTCATCAGACCGCCTATGAAGGTGCGCGCGTAGTGTGTGAGTGCGTGCAGCGCGCCAAGGGCTATCAGGCCTTCCGGGTCGTCTCGATGGATGAATCCACCGCGATCCATCCTGCACAGATGCTGCCGCCGCGGACCCATGTCAGCGTTACGCCGACCAGCGGACTCGAGCGGGCCCAGGTCAAGTGGTTCAACCGCTTGCGCGGATTCGGGTTTTTGACGTGCGGCGAGGGTACGCCGGATATTTTCGTCCATATGGAAACGCTACGCCGCTTCGGTATGACGGAGCTTCGTCCCGGTCAGTACGTGCTGGTCCGCTATGGGCCGGGCTCCAAGGGCATGATGGCCGCCGAAATTCAGCCGGAGAACGGCACGCCGGGACTGTCCTCGCACTGA
PROTEIN sequence
Length: 222
MGSDGFESKKFGGPAGSGAGASKLGPKDFSGAVDRESGIDPFAGLDDAAANLVEISGVIKWFDASKGYGFIIPDNGWPDVLLHVTVLRRDGHQTAYEGARVVCECVQRAKGYQAFRVVSMDESTAIHPAQMLPPRTHVSVTPTSGLERAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRFGMTELRPGQYVLVRYGPGSKGMMAAEIQPENGTPGLSSH*