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SCN18_13_7_16_R5_B_scaffold_701_4

Organism: SCN18_13_7_16_R5_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_8

near complete RP 45 / 55 MC: 5 BSCG 47 / 51 MC: 6 ASCG 10 / 38 MC: 2
Location: comp(1998..2987)

Top 3 Functional Annotations

Value Algorithm Source
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IMB3_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 322.0
  • Bit_score: 420
  • Evalue 1.30e-114
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGJ18145.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 330.0
  • Bit_score: 425
  • Evalue 4.30e-116
TRAP-type C4-dicarboxylate transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 322.0
  • Bit_score: 420
  • Evalue 3.70e-115

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAAATTCGTCGGAATGACTGCGTTGGCGAAGGTCGCCGCGGTCCTCGGCTGTTTCGCCGCCGTGCCGGCCATGGCGCAGAACAAGGTCCAGATCCGGCTCGGCCATGTGCTCGCCGAGAGCCATAGCTGGAATGTTGCGGCCAAGGGCTTCGCCGAGGACGTCGCCAAGGCGACCGAGGGTCGCGTCACCATCCAGGTCTTCCCGTCGGGCCAGCTCGGCACCGAGAAGGACGTCGTCGAAGGCCTGCAGATCGGCACCATGCAGGGCGGCGTCATCGGCAGCGGCTCCTTCCAGCCGATCGAGCCGCGCATGGGCATCGTCGAGCTTCCCTATGCCTGGCCGACCCGTGAGAAGGCCTTCGCCGCCTTCGACGGCGAGATGGGCACCGAGCTCGCCAAGCTGCTCGCGGCCAAGAACATCGTCGTGCTGTCCTGGTGGGAGAACGGCTATCGCCACATCACCACCAAGAAGGCGCCGGTCAACAAGCCGGAAGATCTGAAGGGCGTGAAGATCCGCGTGACGCCCGACAAGGTCCGGCTCGACACCTTCCGCGCCCTCGGCGCGGAGCCGGCGCCGCTGGCCTTCGGCGAGCTCTATTCGGCGCTGCAGCAGGGCGTGTTCGACGCGCAGGAGAACCCGCTCTCGATCATCGATTCCTCGTCCTTCGCCGATGTCCAGAAATACGCCGCCCTGACCGGCCATGTCTGGGGTGCCGCCTGCCTCGTCGTCAGCAAGCGGATCTGGGATCAGGTCGGCCCGGCCGACAAGGAGGCCGTGCTGGCCGCCGCCGCCAAATGGCGCGACGAGCAGCGCAAGATGGTCACCGCCTCCGACCAGCAGCTGGTCGAGAAGCTGACCGCCAAGGGCATGACCGTCAACAAGGTCGATCCGACGCCGTTCATCGCCGCTGTCCAGCCGGTCTGGAAGTCGCAGGAGGCCGTTTATGGCCCGGCCCTGATGGCGCTGCTCGACAAGTACCGCAAGTAA
PROTEIN sequence
Length: 330
MKFVGMTALAKVAAVLGCFAAVPAMAQNKVQIRLGHVLAESHSWNVAAKGFAEDVAKATEGRVTIQVFPSGQLGTEKDVVEGLQIGTMQGGVIGSGSFQPIEPRMGIVELPYAWPTREKAFAAFDGEMGTELAKLLAAKNIVVLSWWENGYRHITTKKAPVNKPEDLKGVKIRVTPDKVRLDTFRALGAEPAPLAFGELYSALQQGVFDAQENPLSIIDSSSFADVQKYAALTGHVWGAACLVVSKRIWDQVGPADKEAVLAAAAKWRDEQRKMVTASDQQLVEKLTAKGMTVNKVDPTPFIAAVQPVWKSQEAVYGPALMALLDKYRK*