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SCN18_10_11_15_R4_B_scaffold_920_21

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 18639..19352

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VWN8_METEP similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 235.0
  • Bit_score: 309
  • Evalue 1.80e-81
Cytochrome C biogenesis protein {ECO:0000313|EMBL:ETR79377.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 237.0
  • Bit_score: 399
  • Evalue 2.40e-108
ccdA; Cytochrome c-type biogenesis protein CcdA similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 236.0
  • Bit_score: 317
  • Evalue 3.10e-84

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Taxonomy

SCN_Rubrivivax_15x → SCN_Rubrivivax_15x → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGACAATAGCGCTGGCGTTTCTCGCAGGCGTCCTGTCGATCCTGTCGCCCTGCGTACTTCCCCTCGTGCCCGTCGTGCTCGGAGCGGCTGTCTCGGAGCACAGACTGGGTCCTGTCGCGCTGGCGGCAGGCCTGGCTGTCTCTTTCGTCGCGATCGGCATGTTCGTTTCCACGGTCGGTTTCTCAATCGGGCTTGACGGGACCTTCTTCCGCGCGATCGGCGGGGTGTTGCTGGCGGGTCTTGGTCTTGTTCTGCTCATTACGCGGTTCCAGGCCAACCTCGCGACGGCTGCGGGACCTGTATCCGACTGGACCGAACGGCAGTTCGGCGGCTTTTCGCGGAAGGGTGTTTCGGGACAGTTCGGTCTCGGGCTCCTGCTCGGAGCAGTCTGGGCGCCATGCGTGGGGCCGACGCTCGGCACTGCGATGATCCTGGCGGCGCGAGGTGAAGATCTCGGGCATTCGGCGCTCACGATGGGCGCGTTCGGTCTTGGATCGGCAATGCCGCTACTCGCGCTTGGCCTCCTGTCTGGGGAAGCCATCCTCCGGTGGCGCGGACGCATGCTGTCGGCGGGCTCCGGCATGAAGGCAGCACTCGGGGCGCTGCTGTTCGCTGCGGGAGTTCTCGTGCTGACGGGTTTCGACAAGGTTCTCGAAGCCGCCATGGTCCGGTCGGCGCCTTCGTGGCTGGTCGACCTGACGACCCGGTTTTGA
PROTEIN sequence
Length: 238
MTIALAFLAGVLSILSPCVLPLVPVVLGAAVSEHRLGPVALAAGLAVSFVAIGMFVSTVGFSIGLDGTFFRAIGGVLLAGLGLVLLITRFQANLATAAGPVSDWTERQFGGFSRKGVSGQFGLGLLLGAVWAPCVGPTLGTAMILAARGEDLGHSALTMGAFGLGSAMPLLALGLLSGEAILRWRGRMLSAGSGMKAALGALLFAAGVLVLTGFDKVLEAAMVRSAPSWLVDLTTRF*