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scn_reactorb_scaffold_43168

Search features with annotation key words

Displaying items 31-60 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_43168_31
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36879..37574)
DNA (696bp) protein (232aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXS4_9GAMM
two component transcriptional regulator
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scn_reactorb_scaffold_43168_32
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37571..39424)
DNA (1854bp) protein (618aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXA6_9GAMM
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EGW23163.1}; Flags: Precursor;; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
histidine kinase
scn_reactorb_scaffold_43168_33
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39435..41675)
DNA (2241bp) protein (747aa)
hypothetical protein id=12552170 bin=BDI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scn_reactorb_scaffold_43168_34
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41841..47774
DNA (5934bp) protein (1978aa)
alpha-2-macroglobulin n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036EE754
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:GAD22459.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
alpha-2-macroglobulin domain-containing protein 2
scn_reactorb_scaffold_43168_35
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47820..48074)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1WAZ9_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34090.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_43168_36
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48228..49103
DNA (876bp) protein (292aa)
methylglyoxal synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FFB0B
Methylglyoxal synthase {ECO:0000313|EMBL:GAD22447.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scn_reactorb_scaffold_43168_37
unknown

Not on your lists

49100..49420
DNA (321bp) protein (107aa)

This feature has no annotations

scn_reactorb_scaffold_43168_38
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49559..51796
DNA (2238bp) protein (746aa)
Penicillin-binding protein 1C n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAZ6_ACISJ
penicillin-binding protein 1C
Penicillin-binding protein 1C {ECO:0000313|EMBL:ABM43421.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_43168_39
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51857..52522
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZB1_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24515.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_43168_40
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52522..53769
DNA (1248bp) protein (416aa)
UPI0003A257C4 related cluster n=1 Tax=unknown RepID=UPI0003A257C4
Diguanylate cyclase {ECO:0000313|EMBL:GAD22444.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase
scn_reactorb_scaffold_43168_41
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53805..54338
DNA (534bp) protein (178aa)
OmpA/MotB domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA9_ALIDB
ompa/motb domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEB83643.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_43168_42
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54472..55647
DNA (1176bp) protein (392aa)
l-lactate dehydrogenase (cytochrome) (EC:1.1.2.3)
L-lactate dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000377732A
L-lactate dehydrogenase {ECO:0000313|EMBL:GAD22442.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scn_reactorb_scaffold_43168_43
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55644..56864
DNA (1221bp) protein (407aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
DNA polymerase IV n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA2_ALIDB
scn_reactorb_scaffold_43168_44
unknown

Not on your lists

56973..57119
DNA (147bp) protein (49aa)

This feature has no annotations

scn_reactorb_scaffold_43168_45
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57193..58785
DNA (1593bp) protein (531aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAZ2_ACISJ
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABM43417.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_43168_46
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58855..60486
DNA (1632bp) protein (544aa)
Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer; K03776 aerotaxis receptor id=12549864 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:EER58141.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer
scn_reactorb_scaffold_43168_47
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60502..61377)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036C3A63
Transcriptional regulator {ECO:0000313|EMBL:GAD22427.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
transcriptional regulator
scn_reactorb_scaffold_43168_48
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61391..61801)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380DB61
Uncharacterized protein {ECO:0000313|EMBL:GAD22426.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scn_reactorb_scaffold_43168_49
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61910..62755)
DNA (846bp) protein (282aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1T4_9BURK
queF; 7-cyano-7-deazaguanine reductase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scn_reactorb_scaffold_43168_50
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62834..64834)
DNA (2001bp) protein (667aa)
Oligopeptide transporter n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RMP2_COMTE
Oligopeptide transporter {ECO:0000313|EMBL:EHN66412.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
oligopeptide transporter, OPT family
scn_reactorb_scaffold_43168_51
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64857..65708)
DNA (852bp) protein (284aa)
procollagen-proline dioxygenase (EC:1.14.11.2)
procollagen-proline dioxygenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003817E8C
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:GAD22423.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scn_reactorb_scaffold_43168_52
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65705..66484)
DNA (780bp) protein (260aa)
UPF0246 protein Dtpsy_2644 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDS0_ACIET
hypothetical protein
UPF0246 protein Dtpsy_2644 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_43168_53
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66753..69776)
DNA (3024bp) protein (1008aa)
ribonuclease E n=1 Tax=Acidovorax radicis RepID=UPI000237668E
ribonuclease, rne/rng family
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scn_reactorb_scaffold_43168_54
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70356..71387
DNA (1032bp) protein (344aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Pseudouridine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDR8_ACIET
RluA family pseudouridine synthase
scn_reactorb_scaffold_43168_55
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71359..72027
DNA (669bp) protein (223aa)
HAD family hydrolase n=1 Tax=Curvibacter lanceolatus RepID=UPI000366224C
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AFU45139.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scn_reactorb_scaffold_43168_56
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72038..72418
DNA (381bp) protein (127aa)
Rieske (2Fe-2S) domain-containing protein id=12549874 bin=BDI species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Rieske (2Fe-2S) domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_43168_57
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72422..73474
DNA (1053bp) protein (351aa)
peptidase S49 n=1 Tax=Acidovorax avenae RepID=UPI0002206D30
Periplasmic serine protease {ECO:0000313|EMBL:GAD22417.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
peptidase S49
scn_reactorb_scaffold_43168_58
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73668..74435)
DNA (768bp) protein (256aa)
uroporphyrin-III methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D332B
Predicted methyltransferases {ECO:0000313|EMBL:GAD22415.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase
scn_reactorb_scaffold_43168_59
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74432..75031)
DNA (600bp) protein (200aa)
septum formation protein Maf n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003658E22
Maf-like protein AVS7_02174 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
maf protein
scn_reactorb_scaffold_43168_60
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75058..75612
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1U3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45144.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 31-60 of 171 in total

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