ggKbase home page

scn_reactorb_scaffold_6725

Search features with annotation key words

Displaying items 121-150 of 242 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_6725_118
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123946..124545)
DNA (600bp) protein (200aa)
FMN reductase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBI3_ACIAP
FMN reductase
FMN reductase {ECO:0000313|EMBL:ADX46148.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_6725_119
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124625..125653)
DNA (1029bp) protein (343aa)
sulfate transporter subunit n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036CA5D8
Sulfate ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAD21629.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
sulfate ABC transporter periplasmic sulfate-binding protein
scn_reactorb_scaffold_6725_120
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125786..126058
DNA (273bp) protein (91aa)
Probable Fe(2+)-trafficking protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWM7_ALIDB
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
fe(ii) trafficking protein yggx
scn_reactorb_scaffold_6725_121
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126164..126832
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W6W0_ACISJ
hypothetical protein
Uncharacterized protein family UPF0126 {ECO:0000313|EMBL:AEF89186.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scn_reactorb_scaffold_6725_122
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126929..128821
DNA (1893bp) protein (631aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBI0_ACIAP
tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scn_reactorb_scaffold_6725_123
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128853..129149)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Aeromonas hydrophila SSU RepID=K1JL41_AERHY
putative vacuolar-type H+ATPase subunit A
Uncharacterized protein {ECO:0000313|EMBL:EKB27263.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
scn_reactorb_scaffold_6725_trna_2
unknown

Not on your lists

comp(129579..129652)
DNA (74bp)
transferRNA Val
scn_reactorb_scaffold_6725_124
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129708..131936)
DNA (2229bp) protein (743aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XZ10_DELAC
GTP pyrophosphokinase {ECO:0000313|EMBL:EPD44739.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scn_reactorb_scaffold_6725_125
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131933..132862)
DNA (930bp) protein (310aa)
Alpha/beta hydrolase fold protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I115_9BURK
alpha/beta fold family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_6725_126
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132933..133715
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EHL21485.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EHL21485.1};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
3-hydroxybutyrate dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1C2_9BURK
scn_reactorb_scaffold_6725_127
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133786..134466)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6E1_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59942.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scn_reactorb_scaffold_6725_128
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134720..135451
DNA (732bp) protein (244aa)
UPI0003D3DCEE related cluster n=1 Tax=unknown RepID=UPI0003D3DCEE
Osmolarity response regulator {ECO:0000313|EMBL:GAD24864.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ompR; osmolarity response regulator
scn_reactorb_scaffold_6725_129
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135517..137013
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Histidine kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6E3_ACIDE
integral membrane sensor signal transduction histidine kinase
scn_reactorb_scaffold_6725_130
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137095..137586)
DNA (492bp) protein (164aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] id=12552705 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_6725_131
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137597..138421)
DNA (825bp) protein (275aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRH0_ALIDB
scn_reactorb_scaffold_6725_132
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138492..141962
DNA (3471bp) protein (1157aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Transcription-repair-coupling factor n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDB8_ALIDK
transcription-repair coupling factor
scn_reactorb_scaffold_6725_133
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141971..144571
DNA (2601bp) protein (867aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002EA1962
regulatory protein LuxR
Regulatory protein, LuxR {ECO:0000313|EMBL:ABQ68882.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
scn_reactorb_scaffold_6725_134
unknown

Not on your lists

comp(144583..145224)
DNA (642bp) protein (214aa)

This feature has no annotations

scn_reactorb_scaffold_6725_135
unknown

Not on your lists

comp(145286..145912)
DNA (627bp) protein (209aa)

This feature has no annotations

scn_reactorb_scaffold_6725_136
unknown

Not on your lists

comp(145930..146841)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00037AA054
scn_reactorb_scaffold_6725_137
unknown

Not on your lists

comp(147132..147350)
DNA (219bp) protein (73aa)

This feature has no annotations

scn_reactorb_scaffold_6725_138
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147423..148094
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I663_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
scn_reactorb_scaffold_6725_139
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148186..148356
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6E8_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER59949.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scn_reactorb_scaffold_6725_140
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148428..149141
DNA (714bp) protein (238aa)
phosphoserine phosphatase n=1 Tax=Acidovorax radicis RepID=UPI0002377455
phosphoserine phosphatase SerB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scn_reactorb_scaffold_6725_141
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149368..150156
DNA (789bp) protein (263aa)
Lipoprotein, YaeC family n=2 Tax=Acidovorax RepID=A1WAL0_ACISJ
YaeC family lipoprotein
Lipoprotein, YaeC family {ECO:0000313|EMBL:ABM43285.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_6725_142
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150250..150897)
DNA (648bp) protein (216aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MD12_ACIET
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ACM33944.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_6725_143
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150968..151891
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAL2_ACISJ
chromosome replication initiation inhibitor protein
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM43287.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_6725_144
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151953..152432)
DNA (480bp) protein (160aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Alicycliphilus denitrificans RepID=E8TZD0_ALIDB
rrf2 family transcriptional regulator
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:GAO21299.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scn_reactorb_scaffold_6725_145
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152531..153247
DNA (717bp) protein (239aa)
Iron-sulfur cluster repair di-iron protein n=2 Tax=Alicycliphilus denitrificans RepID=F4GC47_ALIDK
iron-sulfur cluster repair di-iron protein
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:ADV00952.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scn_reactorb_scaffold_6725_146
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153273..153695
DNA (423bp) protein (141aa)
Globin-like protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TMH1_ACIAC
globin-like protein
Globin-like protein {ECO:0000313|EMBL:ABM32159.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Displaying items 121-150 of 242 in total

View Taxonomy