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scn_reactorb_scaffold_39976_16

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(14608..15177)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM n=1 Tax=Acidovorax radicis RepID=UPI0002375C18 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 189.0
  • Bit_score: 309
  • Evalue 1.80e-81
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 190.0
  • Bit_score: 308
  • Evalue 8.90e-82
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 190.0
  • Bit_score: 308
  • Evalue 4.40e-81

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Taxonomy

Acidovorax sp. KKS102 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGTCCTCCTTTCCTCCACTCGAACCGGCCGAACTCCCCGCTGACGCGGTGGAGGTGGGCCGCATTGCCGACGCCTGGGGCGTCAAGGGCTGGTTCAAGGTGCTGGCGCACAGCGCCAGCCCCGAGGCCCTGTTCGCCGCGCCCCAGTGGTATCTGCAGCCGTCCGAGAAGGGCGCCAGGATCTTCAGCGGCACCGTGCTGCTGGTGCCGCGCCAGACGCGCACGCACTCCGACGCCATCGTCGCCAGCGCCCAGGGGGTGGAGGACCGCAACGCCGCCGAAGCGCTGCGCGGCGCGCGCATCTTCGTCTCGCGCGCCTACTTCCCGCAGACGGAGGAGGATGAGTACTACTGGGTCGATCTGATTGGCCTGGACGTGCTCAACCGCGAGGGCGTGGCCCTGGGCCGTGTGCGCGAGCTGCTGTCCACGGGGCCGCAGACCGTGCTGGTGCTGGCCTACGAAGAGGATGGCAAGGCGCGCGAGCGCATGATTCCCTTCGTGTCGGCCTTCGTCGACAAGGTTGAGCTGGCCGAGCGGCGCATCACGGTCGACTGGCAGCCCGACTATTGA
PROTEIN sequence
Length: 190
MSSFPPLEPAELPADAVEVGRIADAWGVKGWFKVLAHSASPEALFAAPQWYLQPSEKGARIFSGTVLLVPRQTRTHSDAIVASAQGVEDRNAAEALRGARIFVSRAYFPQTEEDEYYWVDLIGLDVLNREGVALGRVRELLSTGPQTVLVLAYEEDGKARERMIPFVSAFVDKVELAERRITVDWQPDY*