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scn_reactorb_scaffold_88414_29

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(27020..28429)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Acidovorax sp. CF316 RepID=J0KJP0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 466.0
  • Bit_score: 486
  • Evalue 2.10e-134
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJE51408.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 466.0
  • Bit_score: 486
  • Evalue 2.90e-134
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 456.0
  • Bit_score: 468
  • Evalue 1.70e-129

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGCACAAGAATGCCGCCCCCCTGGGGGTGCTCTGGATCGCGGCGCTGGCGCTGGCCGGGTGCGCTACCGGCACCGACCCTGGCGCTCCCGCCGTCGCCTTGCCGGCCCAGTGGGCCACCCCGGCGTCCGGCCCGCTGCAGGCCGACGCACAAGCCGACGCCGTGACGCCCGCGTGGTGGCGCAGCTTCGGCAGCGCCGAGCTGGACGGCCTGGTGGCGCAGGCGCGCGCCGGCAATTTCGACCTGGCCGCCGCCGCCGCCCGCGTGGCGCAGGCCGAGGCGCAGGCGCGCCAGGCCGGCGCGCGCCTGCTGCCCGAGGTGGCGGGGGCCGTGAACGCCGCGCGCCAGGGGCGGCTCGGCGGCGATGCCGCGGTGGACGGCACGCGCCTGGGCGTGGCCCTGTCCGCCAGCTATGAAGTGGACGTCTGGGGCCGCCTGGGCGCCACGCGCGACGGTGCGCAGGCCGCGCTGCGCGCCAGCGTGTTCGACCAGGAGGCGGTGCGCCTGAGCATTTCGGCCGGGGTGGCGCATGCCTGGCTGCAGGGCGTGGCCCTGCGCGAGCGCCAGGACATCGCGGCGCTGAACCTGCGCAGCGCCGAGCGGCTGCTGGCCCTGGTGGCGGCGCGCCAGCGCGCGGGCGCAGCGTCGGCGCTGGAGCTGGCCCAGCAGCGCGGCCTGGTGGCAGCGCAGCGCCGCGCCCACGCCAGCGTGCGCCAGCAGGCCGACGCGGCGCAGACGGCGCTGGCGCTGCTCATGGGCCAGGCGGGCCGCGCCGCCAGCGCCACCGCCGCCTTGCAGGGGCTGCGCGTGCCATCCGTGGCGGCCGAGGTGCCGGCGGCCCTGCTGGCGCGGCGCCCCGACATCGCCCGCGCCGAGGCGCACCTGGCCGCGGCCCAGGCCAACGTGGCCGCCGCGCGCGCGGCCATGCTGCCCAGCCTCACCCTGGGCGCCAGCCTGGGCACGGGGGGCGACCGGCTGGAGCGGGCCTTCGACAACCCCGTGTACGCGCTCGCCGCCGCGCTGGCAGCGCCCATCTTCGACGCTGGCCGCCGCGCCGCCGGGCACGAACTGGCCCAGGCGCAGCGCGAGGAACTGCTGGCGGCCTACCGCCGCACGGTGGTGCAGGCCTATGGCGACGTGCAGAACGCGCTGGATGCCGCTGCCGGGGCCGACGCCCAGATGCAGGCCCAGGCCGAGGTGGTGGCGCAGGCGCGCCAGGCGTTCGCGCTGTCCGAATCGCGCTACCGCGCCGGGGCCGACACGCTGCTGACGCTGCTCGATGCCCAGCGCGCGCTCTACGCCGCGCAGGACGAGGCCGCGCAACTGCAACTGGCCCGCCTGCAGGCCCGCGTGGCGCTGTACAAGGCGCTGGGCGGCGGCTGGCAGGCGCCGGAGGGGGCTGCCTCGTAG
PROTEIN sequence
Length: 470
MHKNAAPLGVLWIAALALAGCATGTDPGAPAVALPAQWATPASGPLQADAQADAVTPAWWRSFGSAELDGLVAQARAGNFDLAAAAARVAQAEAQARQAGARLLPEVAGAVNAARQGRLGGDAAVDGTRLGVALSASYEVDVWGRLGATRDGAQAALRASVFDQEAVRLSISAGVAHAWLQGVALRERQDIAALNLRSAERLLALVAARQRAGAASALELAQQRGLVAAQRRAHASVRQQADAAQTALALLMGQAGRAASATAALQGLRVPSVAAEVPAALLARRPDIARAEAHLAAAQANVAAARAAMLPSLTLGASLGTGGDRLERAFDNPVYALAAALAAPIFDAGRRAAGHELAQAQREELLAAYRRTVVQAYGDVQNALDAAAGADAQMQAQAEVVAQARQAFALSESRYRAGADTLLTLLDAQRALYAAQDEAAQLQLARLQARVALYKALGGGWQAPEGAAS*