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SCN18_13_7_16_R2_B_scaffold_6231

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R2_B_scaffold_6231_1
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

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2..325
DNA (324bp) protein (108aa)
aminotransferase IV n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00036E5EEA
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KGH45822.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
SCN18_13_7_16_R2_B_scaffold_6231_2
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(579..1484)
DNA (906bp) protein (302aa)
membrane protein n=1 Tax=Actinopolyspora halophila RepID=UPI000382B056
Membrane protein {ECO:0000313|EMBL:KEI43315.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
hypothetical protein
SCN18_13_7_16_R2_B_scaffold_6231_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1619..2293
DNA (675bp) protein (225aa)
TetR family transcriptional regulator n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EW17_9NOCA
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AFU01070.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
SCN18_13_7_16_R2_B_scaffold_6231_4
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2297..2821)
DNA (525bp) protein (175aa)
fatty acid-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B54B09
UPF0678 fatty acid-binding protein-like protein UK23_01695 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
SCN18_13_7_16_R2_B_scaffold_6231_5
unknown

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comp(2818..3051)
DNA (234bp) protein (78aa)

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Displaying 5 items

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