ggKbase home page

SCN18_14_9_16_R1_B_scaffold_2257_1

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(3..536)

Top 3 Functional Annotations

Value Algorithm Source
Putative amino acid efflux transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7P1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 178.0
  • Bit_score: 321
  • Evalue 4.40e-85
Putative amino acid efflux transmembrane protein {ECO:0000313|EMBL:EYR84159.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 178.0
  • Bit_score: 321
  • Evalue 6.20e-85
LysE family amino acid efflux protein similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 178.0
  • Bit_score: 280
  • Evalue 3.20e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGCCTGACGACCCTGCTTGTCTTTGCCGGCGCGCTGATGATGGCGGCCGGCTCGCCCGGCCCGAGCATTGCCGCTCTGGTCGCCCGCGTGCTGTCCCGCGGGCCGAGGGACGTGCTTCCCTTCCTCGCCGCCATGTGGATCGGCGAAGGCGTCTGGCTCACCTGCGCCGTGCTAGGCCTTGCCGCCATCGCCGAGACCTTCCAGGGCGCCTTCGTCGCCATCAAGTGGCTCGGCGTTGCCTATCTCCTCTATCTCGCCTGGAAGATGTGGTCCGCGCCGGCCGACACGGGCGAGGAGGCCTTGCCCGAGGCGCGCTCGGGCGCAAAGCTTTTCTTCGCCGGGCTGACGGTGACGCTCGGCAATCCCAAGATCATGATGTTCTATTTCGCGCTGCTGCCGGCGATCATCGACCTTGGCGCCGTCACGCTCGCCGGCTGGGCGGGGCTGGTGGCGACCATGTTCGTCGTGCTCGTCGCCATCGATCTTGCCTGGGTCTTCCTCGCGTCGCGCGCCCGGCTGTTCCTGAAAAGC
PROTEIN sequence
Length: 178
MSLTTLLVFAGALMMAAGSPGPSIAALVARVLSRGPRDVLPFLAAMWIGEGVWLTCAVLGLAAIAETFQGAFVAIKWLGVAYLLYLAWKMWSAPADTGEEALPEARSGAKLFFAGLTVTLGNPKIMMFYFALLPAIIDLGAVTLAGWAGLVATMFVVLVAIDLAWVFLASRARLFLKS