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SCN18_14_9_16_R1_B_scaffold_1729_8

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(4726..5637)

Top 3 Functional Annotations

Value Algorithm Source
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 303.0
  • Bit_score: 589
  • Evalue 2.70e-165
fbcF2; coproporphyrinogen III oxidase (EC:1.3.3.3) similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 303.0
  • Bit_score: 574
  • Evalue 1.10e-161
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6L8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 303.0
  • Bit_score: 587
  • Evalue 7.40e-165

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGAACGACCAGACCTGCCGAAAGGCCTGCCCGAGGACATCGAAGACAAGAAGGCGATGGCCCGCGCCTGGTTCGAGCAGTTGCGCAACGCCATCTGCGCCAGCTTCGAGGCCCTCGAGGACGAACTGGAAGGGCCTCTCTCCGACCTGCCGCCGGGCCGCTTCGTCGGCAAGGACTGGCTGCGCGAGGACGGCGAAGGCGGCGGCGGGCGCATGTCGATGATGGAAGGCCGCGTCTTCGAGAAGGTCGGCGTCCACACCTCCACCGTCTTCGGCGAATTCTCGCCGGAATTCCGCACCCAGATTCCGGGCGCCGGCGAAGACCCGCGCTTCTGGGCCTCCGGCATCTCGCTGATCGCCCATCCGGTGAACCCCAACGTTCCGGCCGTGCACATGAACACCCGCATGGTCGTCACCACCAGCCGCTGGTTCGGCGGGGGCGCCGACCTGACGCCGGTGCTCGACCGCCGCCGCGTGATGAGCGATCCCGACACCGCCCTCTTCCACAAGGCGATGGAGATCGCCTGCAACCGCCATCCCGTCGCCGACCATGCGAAGTTCAAGGACTGGTGCGACGAGTATTTCTTCCTCAAGCATCGGGGCGAGCCGCGCGGCACCGGCGGCATCTTCTACGACTGGCTGCACTCGCCCGAAGAGCTCGGCGGCTGGAACGCCGACTTCGCCTTCACGCAGGACGTCGGCCGCGCCTTCGCCATGGTCTATCCGAAGATCGTGCGTTCCAACTTCAACAAGGGCTGGACGGAGGAGGACCGCGACGAGCAGCTCGTGCGGCGCGGCCGTTATGTCGAGTTCAACCTGCTCTACGACCGGGGAACGATCTTCGGCCTGAAGACCGGCGGCAATGTCGATTCCATCCTCTCCTCCATGCCGCCGGTGGTGCGCTGGCCCTGA
PROTEIN sequence
Length: 304
MERPDLPKGLPEDIEDKKAMARAWFEQLRNAICASFEALEDELEGPLSDLPPGRFVGKDWLREDGEGGGGRMSMMEGRVFEKVGVHTSTVFGEFSPEFRTQIPGAGEDPRFWASGISLIAHPVNPNVPAVHMNTRMVVTTSRWFGGGADLTPVLDRRRVMSDPDTALFHKAMEIACNRHPVADHAKFKDWCDEYFFLKHRGEPRGTGGIFYDWLHSPEELGGWNADFAFTQDVGRAFAMVYPKIVRSNFNKGWTEEDRDEQLVRRGRYVEFNLLYDRGTIFGLKTGGNVDSILSSMPPVVRWP*