ggKbase home page

SCN18_14_9_16_R1_B_scaffold_3971_3

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(488..1780)

Top 3 Functional Annotations

Value Algorithm Source
putative sugar isomerase R00627 (EC:5.3.1.-) similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 430.0
  • Bit_score: 802
  • Evalue 5.80e-230
L-rhamnose isomerase n=1 Tax=Pseudomonas stutzeri RepID=Q75WH8_PSEST similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 430.0
  • Bit_score: 843
  • Evalue 6.20e-242
L-rhamnose isomerase {ECO:0000313|EMBL:BAD14073.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 430.0
  • Bit_score: 843
  • Evalue 8.70e-242

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGGCTGAATTCAGGATCGCGCAGGATATCGACGCGCGGGAAAACGACAGGCGGGCCCGGGCGCTGAAGGAAGACTACGAGGCGCTCGGCGCGAACCTCGCCCGCCGCGGCATCGACATCGAGGCCGTCACGGGCAAGGTCGAACAGTTCTTCGTCGCCGTCCCCTCCTGGGGCGTCGGCACGGGCGGCACGCGCTTCGCGCGCTTTCCCGGCACCGGCGAGCCGCGCGGCATCTTCGACAAGCTGGACGACTGCGCCGTCATCCAGCAGCTGACGCGCGCCACGCCCAATGTCTCGCTGCATATCCCGTGGGACAAGGCCGATCCGAAGGAACTGAAGGCGAAGGGCGATGCGCTCGGCCTCGGCTTCGACGCCATGAACTCCAACACCTTCTCCGATGCGCCCGGCCAGAAACATTCCTACAAATTCGGTTCGCTCAGCCACACGGACGCGGCGACACGCGCCCAGGCGGTCGAGCACAATCTGGAATGCATCGAGATCGGCAAGGCCATCGGCTCCAAGGCGCTGACGGTCTGGGTCGGCGACGGCTCCAACTTCCCCGGCCAGAGCAATTTCACCAGGGCCTTCGAGCGCTACCTTGCGGCCATGGCGGAGATCTACAAGGGCCTGCCGGATGACTGGAAGCTGTTCTCCGAGCACAAGATGTACGAGCCGGCCTTTTATTCGACGGTCGTGCAGGACTGGGGCACGAATTATCTCATCGCCCAGACGCTCGGTCCCAAGGCGCAATGCCTCGTCGATCTCGGCCATCACGCGCCGAACACCAATATCGAGATGATCGTCGCTCGCCTCATCCAGTTCGGCAAGCTCGGCGGCTTCCACTTCAACGATTCCAAATACGGCGACGACGACCTCGATGCCGGCGCCATCGAGCCCTATCGCCTCTTCCTCGTCTTCAACGAACTGGTGGATGCGGAGGCGCGCGGCGTCAAGGGCTTCCACCCGGCCCACATGATCGACCAGTCGCACAACGTTACCGACCCGATCGAAAGCCTGATCAACAGCGCGAACGAAATCCGCCGCGCCTACGCGCAGGCCCTTCTCGTCGACCGCACGGCGCTGTCCGGCTACCAGGAGGACAACGACGCCCTCATGGCGACGGAAACGCTGAAGCGCGCCTACCGCACCGATGTGGAGCCGATCCTCGCCGAAGCCCGCCGCCGCACCGGAGGGGCGATCGATCCGGTCGCGACCTACCGCGCCAGCGGCTATCGCCGGAAGGTCGCCGCCGAACGTCCGGCTTCCATCGCCGGTTCCGGCGGCATCGTCTGA
PROTEIN sequence
Length: 431
MAEFRIAQDIDARENDRRARALKEDYEALGANLARRGIDIEAVTGKVEQFFVAVPSWGVGTGGTRFARFPGTGEPRGIFDKLDDCAVIQQLTRATPNVSLHIPWDKADPKELKAKGDALGLGFDAMNSNTFSDAPGQKHSYKFGSLSHTDAATRAQAVEHNLECIEIGKAIGSKALTVWVGDGSNFPGQSNFTRAFERYLAAMAEIYKGLPDDWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLGPKAQCLVDLGHHAPNTNIEMIVARLIQFGKLGGFHFNDSKYGDDDLDAGAIEPYRLFLVFNELVDAEARGVKGFHPAHMIDQSHNVTDPIESLINSANEIRRAYAQALLVDRTALSGYQEDNDALMATETLKRAYRTDVEPILAEARRRTGGAIDPVATYRASGYRRKVAAERPASIAGSGGIV*