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SCN18_30_10_14_R2_B_scaffold_2949_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(30..1085)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EYR78610.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 341.0
  • Bit_score: 477
  • Evalue 1.00e-131
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein id=3348585 bin=GWF2_Methylomirabilis_70_14 species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 27.1
  • Coverage: 336.0
  • Bit_score: 118
  • Evalue 1.10e-23
tauA; Taurine-binding periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 293.0
  • Bit_score: 89
  • Evalue 1.20e-15

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGATCGGAAATATCCTACGCAGGCAATTCATAGGCCTTACCGCCGGCGCCATGGCGGCGGTGCTCATGGGTACTTCGGCATATGCGGCCGACAAGCCCGAGACGGATTCGCTGTCCATCAGCATCGGGCCGGATCTCCCCTTTCTCGTCCACATAGTCGCGAAGGAAAAAGGCTGGTTCGCCGACGCTGGCTTCAAGAGCGTGGAATTCAAGCAGTTTACCTCGGGAAATCTCGCCGGTGAGGCGCTGCTGGCCGACCAGATCCAGCTATGGACGCCGGGCAATCTGCCTCCGGTGGCGATGGTGCATAATGGCGTGCCCGTCGTCATTCTCGGTTCCAACGCCGTCAGCCATGGCCTCGAGAAGCTTGTCGTGCGCAAGGACGCCAAGGTCGAAAAGCCGGAGGACCTCTACAAGATCAAGATCGGCCTTCTGGTCAGTTCCACCTCCGGCGCCATGCTGGGGAACATCGCGAAGAAATACGGGCTTGATCCCTCCAGACTGCAGGCGGTCAATCTGGCACCGCCGGAAGGCCTTGCCGCGCTGAAGAACAACGAGGTCCAGGGTGTCATCTATTGGGAGCCGTTCCCGTATCAGGCTCTGCAAAACCCGGACATGGAACTGCTCCATACCGGCACCAAGAGCTATTTTCCGCAGAACAAGGGCGAGGATGCCCAGATATCAAACAACCGCACCGTCTGGGTCGCTTCGCAGGACTGGGTCAGGAAGAATCCGATCGCGACCAAGGCCCTCGTCGGCGTGCTCCTGAAGGCGCAGGCCTGGGTCAGCGATCCGGCGCATCAGCAGGAGGCGCTCAAGATCTTCTCGGACTATGAGAAGCAGCCCATCGAGATGAACAAGGCGATTATCTCGAACTACACGTTCAACCCAAAATTCGACCAAGCCTATGTCGACGACATGAAGGCGATCGAGGCCTTCCTGAAGAGCACGAATCGCATCCCCAGCGAGGGCGACCCGCTGGATTACAGCTATTCGGAGCCGATGAAGTCGATCGATCCTTCGCTTGTCGAAATCGACGGCAAGTGGAAGCCTTGA
PROTEIN sequence
Length: 352
MIGNILRRQFIGLTAGAMAAVLMGTSAYAADKPETDSLSISIGPDLPFLVHIVAKEKGWFADAGFKSVEFKQFTSGNLAGEALLADQIQLWTPGNLPPVAMVHNGVPVVILGSNAVSHGLEKLVVRKDAKVEKPEDLYKIKIGLLVSSTSGAMLGNIAKKYGLDPSRLQAVNLAPPEGLAALKNNEVQGVIYWEPFPYQALQNPDMELLHTGTKSYFPQNKGEDAQISNNRTVWVASQDWVRKNPIATKALVGVLLKAQAWVSDPAHQQEALKIFSDYEKQPIEMNKAIISNYTFNPKFDQAYVDDMKAIEAFLKSTNRIPSEGDPLDYSYSEPMKSIDPSLVEIDGKWKP*