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SCN18_30_10_14_R2_B_scaffold_2949_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(1147..1917)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHF5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 252.0
  • Bit_score: 367
  • Evalue 1.00e-98
ABC-type nitrate/sulfonate/bicarbonate transport system permease component {ECO:0000313|EMBL:EYR78609.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 252.0
  • Bit_score: 367
  • Evalue 1.40e-98
nitrate/sulfonate/bicarbonate ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 247.0
  • Bit_score: 180
  • Evalue 5.00e-43

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGAGAGGCGGTTCGCGCATAAGCAGCACCTTTTGGGGGCTGGCGGGGATCGCCATATTCCTGGCAAGCTGGGAGCTTGCCACCCGGCTTGGGGCTATCGATCCCACCATCTTTCCAGGTCCGGCAGCCGCGATCCGCTCCGCCGTGCAACGTCTGCCCGCGAGCGTCTTCCTCGACAACATGGCGTGGAGCCTGTTCCGGGTGATTGGCGGCTTCGTGCTGGGCGCGGTGGCCGGCACGGTGATCGGCTTCGCCGCCGGCTGGTATCGCGGCTTCGGCTATCTCGCACGCCCCCTGATCGAGCTGCTGCGGCCGATCCCGCCGCTCGCCTGGATCCCGCTCGCCATCATCTGGTTCGGGCTGGGCGAGCCGTCGAAATTCTTCATGGTGTTCCTCGGGGCCTTCTTTCCGATCGTCACGTCGGCCTATCACGGGATTACCCATATCGACTCTTCGCTGATCCGGGCTTCGCGCAGCTTCGGGCTGAAGGGCCTCGGCATGCTCTTCCATGTCGGCATTCCCGCCTCCGCGCCCGATCTCGCGACGGGACTGCGCATAGGCTGGGGGCTGAGCTTCGGCGTCCTCGTCGCCGCCGAACTGATCGCGGCCGATCGCGGACTCGGCTTCATGATCATGAACGAAAGAAACAGCGGCGGCTCGGTGAGCGTGATCATCGTGGGCATCCTGCTCATCGGATTGCTCAATCTGGTGACGGACGCTGCGCTGGCGGCTTTGATCCAACGCTGGATCGGACGGTGGCACGGCGCCTGA
PROTEIN sequence
Length: 257
MRGGSRISSTFWGLAGIAIFLASWELATRLGAIDPTIFPGPAAAIRSAVQRLPASVFLDNMAWSLFRVIGGFVLGAVAGTVIGFAAGWYRGFGYLARPLIELLRPIPPLAWIPLAIIWFGLGEPSKFFMVFLGAFFPIVTSAYHGITHIDSSLIRASRSFGLKGLGMLFHVGIPASAPDLATGLRIGWGLSFGVLVAAELIAADRGLGFMIMNERNSGGSVSVIIVGILLIGLLNLVTDAALAALIQRWIGRWHGA*