ggKbase home page

SCN18_30_10_14_R5_P_scaffold_492_8

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(7595..8434)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSY4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 279.0
  • Bit_score: 414
  • Evalue 6.00e-113
LysR family transcriptional regulator {ECO:0000313|EMBL:CDX39927.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 279.0
  • Bit_score: 487
  • Evalue 1.00e-134
LysR family transcriptional regulator HdfR similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 281.0
  • Bit_score: 320
  • Evalue 4.40e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGGATATTGACCGAGCGCGCACGTTTCTGGAGATCGTGCATTCCGGCAGTTTCCTGCGCGCGGCAGAGAGACTTTTCGTAACGCAGACCACGGTCAGCGCCCGCATCCGCACGCTTGAGGAGGAGCTTGGGCGGCAGCTTTTCGTGCGCAACCGCAATGGCGCGCACCTGACGCCGGCCGGCCGGGAGTTCGAGCGCTTCGCCCAGTCCTTCGTACAGATCTGGGAACGCGCCCGCCACCAGCTTGCCATACCGAGCGGGCGCACCAGCGTCGTGGCGCTTGGCGGCGAGCTCAGCCTTTGGAACCCGCTTCTGCTCGACTGGCTGGTGTGGATGAAGAAATCCAAGCCGGAAATCGCCATCCATGCCCATGTCGGCGTGCCCGACCAATTGCTGGAACAGTTGCGAACCGGCGTGCTCGACATTGCCGTGCTCTACGCGCCGAAACTCCTGCAAGGCTTCAGGGTCGAGCTTCTGGCGGAAGAACAACTGGTGCTGGTCCGCAGCAAGGACACCGAGACCACCAGTTCCAAGGACTATGTCTATGTCGATTGGGGGCCGCTCTTCGCCGCCCAGCACGATTCCGGATCGGCGGCTTTCGGGGAGCCGGGCCTTCTCGTCGGTCTCGGTCCGCTCGGGCTGAGCTACATATTGCGCGCCGGCGGCACGGGATATTTCCGCAAGGGCGTTGTCGCGCCTCACTTGGAATCGGGCGAACTTGAACTCGTCGAGGGCGCGCCGGAGTTCACTTATCCCGCCTATGCCGTCTACCCGGAGCCTGCCGAAGCGCGCGCCGACATCCAGGATGCACTGCGTGGGCTGAAGGAGGTCGTGCGCTAG
PROTEIN sequence
Length: 280
VDIDRARTFLEIVHSGSFLRAAERLFVTQTTVSARIRTLEEELGRQLFVRNRNGAHLTPAGREFERFAQSFVQIWERARHQLAIPSGRTSVVALGGELSLWNPLLLDWLVWMKKSKPEIAIHAHVGVPDQLLEQLRTGVLDIAVLYAPKLLQGFRVELLAEEQLVLVRSKDTETTSSKDYVYVDWGPLFAAQHDSGSAAFGEPGLLVGLGPLGLSYILRAGGTGYFRKGVVAPHLESGELELVEGAPEFTYPAYAVYPEPAEARADIQDALRGLKEVVR*