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2019_SCN_bioreactor_t2_biofilm_scaffold_9517_1

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(2..256)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 72.0
  • Bit_score: 127
  • Evalue 8.20e-27
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 72.0
  • Bit_score: 122
  • Evalue 4.10e-26
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Roseomonas sp. B5 RepID=UPI00031C92C1 similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 74.0
  • Bit_score: 127
  • Evalue 3.40e-27

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Taxonomy

Roseomonas cervicalis → Roseomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGAACGCCCCGATTGTCCCGCCGTCTGTTTCGACGCGCCCTGTGACTCCGTTGCTGGACCGTGTGCATGTTCCGGCGGATTTGCGCAATTTCTCACCGGAGCAGCTGAAGCAGGTGGCGGCTGAGCTACGGGCCGAGACGATCGACGCGGTCTCGACGACCGGGGGCCATCTTGGGGCGAGCCTCGGGGTGGTGGAGCTGACGGTTGCGATCCACGCGATTTTCGACACGCCGACCGACCGTCTGATCTGGGAT
PROTEIN sequence
Length: 85
MNAPIVPPSVSTRPVTPLLDRVHVPADLRNFSPEQLKQVAAELRAETIDAVSTTGGHLGASLGVVELTVAIHAIFDTPTDRLIWD