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OR_08082017_2m_0_2um_scaffold_1553

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08082017_2m_0_2um_scaffold_1553_1
unknown

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comp(359..733)
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

OR_08082017_2m_0_2um_scaffold_1553_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(800..1153)
-----------------
DNA (354bp)
protein (118aa)
N utilization substance protein B homolog n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1W4_HALNC
NusB antitermination factor
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_3
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1349..1678)
-----------------
DNA (330bp)
protein (110aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Beggiatoa alba B18LD RepID=I3CEM5_9GAMM
OR_08082017_2m_0_2um_scaffold_1553_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1675..2808)
-----------------
DNA (1134bp)
protein (378aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1W6_HALNC
3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:ACX96689.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2898..3548)
-----------------
DNA (651bp)
protein (217aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ACX96690.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ACX96690.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Riboflavin synthase, alpha subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1W7_HALNC
OR_08082017_2m_0_2um_scaffold_1553_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3569..4711)
-----------------
DNA (1143bp)
protein (381aa)
riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1W8_HALNC
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4701..5201)
-----------------
DNA (501bp)
protein (167aa)
Transcriptional repressor NrdR n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1W9_HALNC
ATP-cone domain-containing protein
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5218..6471)
-----------------
DNA (1254bp)
protein (418aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Serine hydroxymethyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1X0_HALNC
OR_08082017_2m_0_2um_scaffold_1553_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6761..7285
-----------------
DNA (525bp)
protein (175aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1X2_HALNC
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACX96695.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7556..9757)
-----------------
DNA (2202bp)
protein (734aa)
Heavy metal translocating P-type ATPase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1X3_HALNC
ATPase P
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACX96696.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9841..10644)
-----------------
DNA (804bp)
protein (268aa)
FixH family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1X4_HALNC
FixH family protein
FixH family protein {ECO:0000313|EMBL:ACX96697.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10674..12095)
-----------------
DNA (1422bp)
protein (474aa)
Cytochrome c oxidase accessory protein CcoG n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1X5_HALNC
cytochrome C oxidase accessory protein CcoG
Cytochrome c oxidase accessory protein CcoG {ECO:0000313|EMBL:ACX96698.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12367..13344)
-----------------
DNA (978bp)
protein (326aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1X6_HALNC
cytochrome C oxidase cbb3-type subunit III
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13322..13555)
-----------------
DNA (234bp)
protein (78aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1X7_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96700.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13602..14231)
-----------------
DNA (630bp)
protein (210aa)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1X8_HALNC
cytochrome C oxidase cbb3-type subunit II
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:ACX96701.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_08082017_2m_0_2um_scaffold_1553_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14246..14356)
-----------------
DNA (111bp)
protein (37aa)
cytochrome C oxidase cbb3-type subunit I (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:ACX96702.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACX96702.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1X9_HALNC
Displaying 16 items

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