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2019_SCN_bioreactor_t3_biofilm_scaffold_11810_7

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(6267..7193)

Top 3 Functional Annotations

Value Algorithm Source
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 308.0
  • Bit_score: 604
  • Evalue 8.30e-170
ornithine carbamoyltransferase (EC:2.1.3.3) similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 306.0
  • Bit_score: 541
  • Evalue 1.30e-151
Ornithine carbamoyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=OTC_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 306.0
  • Bit_score: 541
  • Evalue 4.70e-151

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGACCCGGCATTTCCTGAACCTGACCGACGCGGGCGGCGATGCCGTTGCCGCGATGCTCAACGACGCGATCGACCGGAAGGCGGCGCGCAAGGGCTTCACCAAGGGGCGCGCCGATGGCGATGCCCCCCTCGCCGGGCATGTGCTGGCCATGGTGTTCGAAAAGAACTCCACCCGCACGCGCGTGTCGTTCGACGTGGCGATGCGCCAGCTTGGCGGCAGCGCACTGGTGCTCGACGCCGGCACCACCCAGCTTGGCCGGGGCGAGACGATCGCCGATACCGCGCGCGTGCTGAGCCGCATGGCCGACGCCATCATGCTGCGCACCGACGATCACGCCAAGGTCGAGGAACTGGCCCACCATGCCACCGTGCCGGTGATCAACGGGCTGACCGACCTGTCCCACCCCTGCCAGATCATGGCCGACCTGCTGACCGTGATCGAGCATGGCAAGGCCCTGCCCGGCCTGGAAGTCGCCTGGCTGGGCGATGGCAACAACGTGCTCAACTCGATCGTCGAAGCGGCGGGGCTGATGAAGTTCAACGTTCGCATCGGCGTGCCCGAAGGCTATGAATCCGATGCCGGGTTCATCGCCCGCGCGCAGGCCGGCGGCGCGCGCATCTCGCTTCACCGCGACGCCGCCGAAGCCGCGCGCGGCGCGGATGTGGTGGTGACCGACACCTGGATTTCGATGGGGCAGGCCCACGCCGAAGCCAAGCTGCAGGCCATGGCACCCTACCAGGTCAACGATGCGCTGATGGCGCAGGCGAAAGCGGACGCGCTGTTCCTGCACTGCCTGCCCGCGCATCGCGGCGAAGAGGTGACCGATTCGGTGATCGACGGCGCGCGGTCGGTGGTATGGGATGAAGCGGAAAACCGCATCCATGCCCAGAAGTCGGTGCTGCGCTGGGTTTTCGGCCAGATCTGA
PROTEIN sequence
Length: 309
MTRHFLNLTDAGGDAVAAMLNDAIDRKAARKGFTKGRADGDAPLAGHVLAMVFEKNSTRTRVSFDVAMRQLGGSALVLDAGTTQLGRGETIADTARVLSRMADAIMLRTDDHAKVEELAHHATVPVINGLTDLSHPCQIMADLLTVIEHGKALPGLEVAWLGDGNNVLNSIVEAAGLMKFNVRIGVPEGYESDAGFIARAQAGGARISLHRDAAEAARGADVVVTDTWISMGQAHAEAKLQAMAPYQVNDALMAQAKADALFLHCLPAHRGEEVTDSVIDGARSVVWDEAENRIHAQKSVLRWVFGQI*