ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_11810_19

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 17924..19240

Top 3 Functional Annotations

Value Algorithm Source
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3I8_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 438.0
  • Bit_score: 709
  • Evalue 1.90e-201
UDP-glucose/GDP-mannose dehydrogenase family protein {ECO:0000313|EMBL:GAO54930.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 416.0
  • Bit_score: 810
  • Evalue 1.10e-231
UDP-glucose/GDP-mannose dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 438.0
  • Bit_score: 709
  • Evalue 5.30e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGTACCCTCCGATTGCCGCCACGCCACAGCCCGGGGCCACTGGTTCCGTCACTGCGGCGACAAGGGTGACCGTGGTCGGCCTGGGCTATGTCGGGCTGCCGCTGGCTGTGGCGCTGGCGCGGCAGTTCTTCGTCACCGGCCTCGACATCGATCGCCGCCGGATCGCCGAACTTTCCGAAGGGCATGACCGCACCGGCGAGATCGAGCCTGGGCAGCTTTCGCTTTCGGGTCTCGGGGTGACCAGCGATGCGCAAGTCTGCCCGCCCAGTGATTTCTATATCGTGACCGTGCCCACCCCCATCGATGCCGCGAATCGCCCGGACCTGCGTCTTGTGGAAGCCGCCTCGCGCACGGTCGGGGCCATGCTCCCGGCCGCTGTGCAGGAAGGGCGCGCGCCGGTGGTGGTGTTCGAAAGCACGGTCTATCCGGGGGTGACGGAAGAGATTTGCGGGCCTTTGCTGGAAGAGGCGTCTGGGCTGGTCTGCGGCCGGGATTTCTTCCTCGGCTACAGCCCCGAGCGGATCAATCCGGGCGATCGCGAACACACCATCGACCGGATCACCAAGGTGGTATCGGGGCAGACGCCCGAGGTGCTCGACCGGGTTGCCGATCTCTATGGCGCGATCACCAGCGGCGGCGTGTTCCGCGCCGCCTCGATCAAGGCGGCCGAAGCGGCCAAGGTGATCGAGAACGCCCAGCGCGACATCAACATCGCGTTCATGAACGAGATCGCGCAAATCTTCTCGAAAATGGATATTTCCGTGTGGGACGTGCTCGAGGCAGCGCGCACCAAGTGGAATTTTCTGCCGTTCACGCCCGGGCTGGTCGGCGGCCACTGCATCGGCGTGGACCCGTACTATCTCTCGCACCGGGCCGAGGCGCTGGGGCATGATCCGCAGGTCATCCTGGCCGGGCGCGGTGTCAACGATACCATGGCGCAATGGGTCGCGGGCGAATTGCACGCCAAGCGCGGCGGGGCCGCCGGCAGCGTGCTGGTGCTGGGGCTGACCTTCAAGGAAAACGTGCCCGATCTGCGCAATTCGAAGGTCGCCGATGTCGTGCACGCGCTGGCGGGCATGGGCCACGCGGTCACCGTGCACGATCCGATGGCCGATGCCGCCGAAGCCCGGCACGAATACGGGCTGGACCTGTCCGCCAACGCGCTGGAGCGGACTTACGATCTTGTCCTTCTCGCCGTGCCGCACCAGGCCTATCTGGCGCTGGGCGAAAATGCGATCGCGGCGCTCGTTGCGCCCGGAGGCACACTGGCCGATCTCAAGGGCGTTCTGAACGGCAAGGCGGACTGGAAGCTCTGA
PROTEIN sequence
Length: 439
MYPPIAATPQPGATGSVTAATRVTVVGLGYVGLPLAVALARQFFVTGLDIDRRRIAELSEGHDRTGEIEPGQLSLSGLGVTSDAQVCPPSDFYIVTVPTPIDAANRPDLRLVEAASRTVGAMLPAAVQEGRAPVVVFESTVYPGVTEEICGPLLEEASGLVCGRDFFLGYSPERINPGDREHTIDRITKVVSGQTPEVLDRVADLYGAITSGGVFRAASIKAAEAAKVIENAQRDINIAFMNEIAQIFSKMDISVWDVLEAARTKWNFLPFTPGLVGGHCIGVDPYYLSHRAEALGHDPQVILAGRGVNDTMAQWVAGELHAKRGGAAGSVLVLGLTFKENVPDLRNSKVADVVHALAGMGHAVTVHDPMADAAEARHEYGLDLSANALERTYDLVLLAVPHQAYLALGENAIAALVAPGGTLADLKGVLNGKADWKL*