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2019_SCN_bioreactor_t3_biofilm_scaffold_40301_5

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 5602..7032

Top 3 Functional Annotations

Value Algorithm Source
D-2-hydroxyacid dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5BF10 similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 480.0
  • Bit_score: 758
  • Evalue 2.20e-216
D-2-hydroxyglutarate dehydrogenase {ECO:0000313|EMBL:GAO56239.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 476.0
  • Bit_score: 926
  • Evalue 1.10e-266
FAD linked oxidase-like protein similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 470.0
  • Bit_score: 714
  • Evalue 1.00e-203

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGTCCACATCCTTTTCGCCGACCGCCTTTCTGGAGGAAGCAACCGCCCTGCTCGGGCCCAAGGGCATCACCACCGATCAGGAGGCCATGGACGGGTGGCTGACTGACTGGCGCGGTCGCTTCACCGGCCGCGCGCTGGCCATGGCGTCGCCCGCCGATACGGACGAGGTGGCGGCCCTGGTCAAGCTTTGCGCCCGGCATGGCGTGCCGATCGTGCCCCAGGGCGGCAACTCCGGCATGTCCGGCGGGGCAACGCCCGACCGGACCGGCAACGCGCTGTTGCTCACCCTGCGCCGCATGAACGCCATCCGCGCCGTCGACACCGAAAACCGCACCGCGACCTGCGAAGCCGGCGTCGTGCTGCAGGTCTTGCACGAAGCGGCCGAAAAGGAAGCCTTGCGCTTTCCGCTCTCGCTGGGCGGCAAGGGTTCGGCGACCGTGGGCGGGCTCATCTCCACCAATGCCGGGGGCACGCAAGTGCTGCGCCACGGATCGATGCGCGCGCTGGTGCTGGGGCTGGAAGCGGTGCTGCCCGATGGTTCGGTGTTCGATGCGCTCACCCCGTTGAAAAAGGACAATCGCGGTTTCGATCTCAAGCAGCTGCTGATCGGATCGGAAGGAACGCTGGGCATCGTTACCGCCGCCACGCTCAAGCTGGAACCGGCGGTTGCGGCCCGGGCGGTGCTGTGGGCGGGCCTGGAATCGCTCCCGGTCGCGCGTACTCTGCTGCTTCATGCCGAAAGCGTCGCCGGCGGCGCACTGGAAGGCTTCGAGGTTCTGCCGCAGCACAGCCTCGATGCGGTGATCGATTACCTGCCGACGGCGCGCGCACCGCTGGCGGAAGCCCATCCCTGGCACGTGCTGATCGAACTGGTTGCCGATGCCGACCGTGCGGAAGGCCTGCCCGACCTGGCCGAACGCCTGCTGATCAGCGCGTTCGAGGCGGGGCTGGTCAACGACGCGACGATCGCCGCGAGCGAGACCCAGGCCGAACAGATGTGGCTGATCCGGGAATCGATCGCGCCGGCGGAGCGCGCGATCGGCCCGGCTGTCCAACACGACATCAGCGTGCCCGTGGAGCGAATGCCCGAATTCGTCGAAACAGCCGTTCCGCTGATCGAAGCCGCTTGGCCCGGCACCAGCGCGGTGGGTTTCGGCCATCTGGGCGATGGCAACATCCATTTCCACGTCCTGGCGCCCGCCGGGGTCGATGCCGCGCAATGGCAGGCAGGCGATGGCAAGGCGATCAGCCGCCAGGTCCACGATCTCGTCACCCAATGGAAGGGGTCGATTTCGGCCGAACACGGCATCGGGCAACTCAAGCGCGACGAACTGGAGCGGCTGGGCGATCCGGTGGCGTTGCACATGATGCGCGCCATCAAGCAGGCGCTCGATCCGCAGGGGCTGATGAATCCCGGCAAGCTGATCTGA
PROTEIN sequence
Length: 477
MSTSFSPTAFLEEATALLGPKGITTDQEAMDGWLTDWRGRFTGRALAMASPADTDEVAALVKLCARHGVPIVPQGGNSGMSGGATPDRTGNALLLTLRRMNAIRAVDTENRTATCEAGVVLQVLHEAAEKEALRFPLSLGGKGSATVGGLISTNAGGTQVLRHGSMRALVLGLEAVLPDGSVFDALTPLKKDNRGFDLKQLLIGSEGTLGIVTAATLKLEPAVAARAVLWAGLESLPVARTLLLHAESVAGGALEGFEVLPQHSLDAVIDYLPTARAPLAEAHPWHVLIELVADADRAEGLPDLAERLLISAFEAGLVNDATIAASETQAEQMWLIRESIAPAERAIGPAVQHDISVPVERMPEFVETAVPLIEAAWPGTSAVGFGHLGDGNIHFHVLAPAGVDAAQWQAGDGKAISRQVHDLVTQWKGSISAEHGIGQLKRDELERLGDPVALHMMRAIKQALDPQGLMNPGKLI*