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2019_SCN_bioreactor_t3_biofilm_scaffold_40905_4

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(4659..5057)

Top 3 Functional Annotations

Value Algorithm Source
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 132.0
  • Bit_score: 282
  • Evalue 2.40e-73
protein-methionine-S-oxide reductase (EC:1.8.4.11) similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 130.0
  • Bit_score: 253
  • Evalue 3.10e-65
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G310_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 130.0
  • Bit_score: 253
  • Evalue 1.10e-64

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGGCCGACAAGCTGAACCTCACCGAAGCCGAATGGCGCGAAAGGCTGACGCCGGAGCAGTACGCGATCCTGCGGCAGGCGGGCACCGAGCGCGCCTTCACCGGCAAGTACGAAAAGAACAAGGCGGCGGGCGACTATGTCTGCGCCGGCTGCGGCGCGCCGCTGTTCGCCTCCGCCACCAAGTATGACAGCGGCTCCGGCTGGCCGAGCTTCTACGCGCCGATGGAAGCCGAGGCGGTGGACGAACACCGCGATGTCACGCACGGCATGGTGCGCACCGAAGTGCGCTGTGCGCGCTGCGACGGGCATCTGGGCCATGTGTTCCCCGATGGCCCCGCGCCCACCGGCCTGCGTTATTGCATCAACAGCGCCTCGCTGGATTTTTCGCCCGAGGACTGA
PROTEIN sequence
Length: 133
MADKLNLTEAEWRERLTPEQYAILRQAGTERAFTGKYEKNKAAGDYVCAGCGAPLFASATKYDSGSGWPSFYAPMEAEAVDEHRDVTHGMVRTEVRCARCDGHLGHVFPDGPAPTGLRYCINSASLDFSPED*