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2019_SCN_bioreactor_t3_biofilm_scaffold_40905_9

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 7936..8469

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G313_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 167.0
  • Bit_score: 277
  • Evalue 7.30e-72
Transcriptional regulator of hxlR family {ECO:0000313|EMBL:GAO53804.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 177.0
  • Bit_score: 357
  • Evalue 6.00e-96
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 167.0
  • Bit_score: 277
  • Evalue 2.10e-72

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGGGGTACAAGCGCGACGACATGCACAAACTTCACGAACCCCTTGCCGAGATCGGACAGTGTGGCCTTCCCGTGGCGCTCGAAGCCATGGGCGAGCGCTGGTCGTTCATGATCCTGCGCGCCGCCCTGAACGGCGTCCGGCACTTCGAGGATTTCCTCGACGAGCTCGGGATCGCCCGGAACATCCTTTCGAACCGCCTGTCAAGGCTGGTCGAAGCGGGCATTCTCAAGCGCGAGCATTGCGCCGACGATCGCCGCCGCATCGAATACCGGTTGACGGAAAAGGGATTCGACCTGTTGCCGGCCATGCTGGCATTGCGCCAGTGGGGCGAGAAATGGCAACTCGGCGTCGCCGCCAATCCGGTGCTGTGCGACGCGCGCGACGGCAGGCCCATCGCGCCGATCACGATCCGCGCGCACGACGATCGCCAGTTGAAGCACAGCGACCTCACCTGGCGTGATCTGGCGGATGTGGAAGCGGAAGAAGCGGGCGGCGCTGTGGCCGGAACATCTCCTGTCCGCATCGTCGGGTAG
PROTEIN sequence
Length: 178
MGYKRDDMHKLHEPLAEIGQCGLPVALEAMGERWSFMILRAALNGVRHFEDFLDELGIARNILSNRLSRLVEAGILKREHCADDRRRIEYRLTEKGFDLLPAMLALRQWGEKWQLGVAANPVLCDARDGRPIAPITIRAHDDRQLKHSDLTWRDLADVEAEEAGGAVAGTSPVRIVG*