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2019_SCN_bioreactor_t3_biofilm_scaffold_112403_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 2..1162

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFF4BB related cluster n=1 Tax=unknown RepID=UPI0003CFF4BB similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 417.0
  • Bit_score: 207
  • Evalue 1.50e-50
Uncharacterized protein {ECO:0000313|EMBL:GAO54775.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 386.0
  • Bit_score: 724
  • Evalue 5.30e-206
peptidase C14, caspase catalytic subunit p20 similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 373.0
  • Bit_score: 194
  • Evalue 5.00e-47

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
CCCGGCTTTATCGGCCTGCCCGACCGGTTCGGCGGGGTGGTGTTCTATTCCACCGCGCGCGGCAGCGTCGCCTATGACGCGCGGCCCTTTCCCACGGGCACCAACAGCCCCTTCGCCAGCGCCGTGGTCGAATGGCTGGCCACGCCCGGCGTGAACCTGACGGACTACATCGGCTTCGTGATGGAAGACGTGAAGTCCGGCACCGAGCGGTTCCCTTACGGGGTGCAGAGCCCGATTCCCTATGGCCAGTTGCCGGACCAGAACCGGTTCTACCTGCGCCGCGCGGCGGCGGTCGCGCCCGCGCCGGCCGCCGCCCTGCCCACCGCCGCGCCCGCCGCCCCGTCCGCGATGGCCGAGGCCCGCGCGGCGATCGCGGCCATTCCGCCCGACGATCTGGCGCGCGAGGACGGACCGATCCTGGCAGCCCGCGTCCTCAAGCGGGCGCGCCCCGAACAGATTGCCGCGCTGGCCGGCAGCGGCGACGAGCTGGCGCAGTATGTCTATGGCACGATGCTCTACCTCGGTCTGGGCGTGCCGCGCGATCCCGTTGCCGCGCGGGGCTTTCTGGCCGATGCGGCGCGCAGCGGAAATCCGGCGGTGCTGACCGTCTATGCCTATTTCCTGCAATTCCTGGGCGATCGCCCGGGGGACCGCGCGGAAGCCCTGCGCGTCTATGCCCAGGCGGCGGAGGCGGGCTATGCCAAGGCGCAGTCGAACCTCGCCTACATGCTCTATACCGCTCCCCCGCCCGAACAGGACCGGGCGCGGGCGATGGCCCTGTGGCGGGCCGCGGCCGGGGCGGACTATCCCTATGCCGCCTATGCGCTGGGGTACTACGGCGGCGAACGCGATGCGGCGCGGACGCGGCTGGCGGCGCTGGCCGCCGCCGGCAGCCGTTCGGCCGACAACTGGCTATGCCAGCTTGAAGCCGGCACCGCGCCCGAGCAGAAGCCAGAGACGGTCTTCGCCAACTGCCTGCGCGCGGCACAGGACAACCGGCCGGTGGCCATGGCCGCCACGGCCTGGCTCTATGCCACCGGGAAGGGGGTTGCCGTATCGGCAAAGGAAGCCAAATACTGGGCGCGGCTGGCGCGCAATTCGCTGAGCCCTTCCGATGCCCAGCTGGGCACCTATCTGGACTGGTACGAAAAGAAGAAGTGA
PROTEIN sequence
Length: 387
PGFIGLPDRFGGVVFYSTARGSVAYDARPFPTGTNSPFASAVVEWLATPGVNLTDYIGFVMEDVKSGTERFPYGVQSPIPYGQLPDQNRFYLRRAAAVAPAPAAALPTAAPAAPSAMAEARAAIAAIPPDDLAREDGPILAARVLKRARPEQIAALAGSGDELAQYVYGTMLYLGLGVPRDPVAARGFLADAARSGNPAVLTVYAYFLQFLGDRPGDRAEALRVYAQAAEAGYAKAQSNLAYMLYTAPPPEQDRARAMALWRAAAGADYPYAAYALGYYGGERDAARTRLAALAAAGSRSADNWLCQLEAGTAPEQKPETVFANCLRAAQDNRPVAMAATAWLYATGKGVAVSAKEAKYWARLARNSLSPSDAQLGTYLDWYEKKK*