ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_112403_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(1739..2920)

Top 3 Functional Annotations

Value Algorithm Source
tRNA nucleotidyltransferase {ECO:0000313|EMBL:GAO54777.1}; EC=2.7.7.72 {ECO:0000313|EMBL:GAO54777.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 393.0
  • Bit_score: 741
  • Evalue 5.50e-211
Polynucleotide adenylyltransferase region n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBW9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 393.0
  • Bit_score: 562
  • Evalue 3.30e-157
polynucleotide adenylyltransferase similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 393.0
  • Bit_score: 561
  • Evalue 1.60e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGACCGGCCACCTGCCCGCCGCCCCGTGGACGCAGCGCGCGGATCTCGCCGCGCTGGTCGCCGCGCTCGATCCGCTGGAGCAGGGCAACTGCCGCTATGTCGGCGGCGCGGTACGCGACACGCTGCTGGGCGCGCCGGTCAAGGACATCGACATGGCGACCCAGCTCGTGCCGCAGGAAACCGTGGCGCGGCTGGAAGCGGCCGGCATCCGCACCATTCCCACCGGCATCGCCCATGGCACCGTCACCGCGCTGCTGCCCGAAGGCGGGGTGGAGATCACCACGCTGCGGCGCGACGTTTCCACCGACGGCCGCCACGCCACGGTCGCCTTCTCCACCGCATGGCGCGAGGACGCGGCACGGCGCGATTTCACGATCAACGCGCTCTATGCCGATCCGCGCACGCTGGCCGTCACCGATTTCTTCGGCGGGCTCGACGATCTGGCCGCGCGCCACGTCCGCTTCATCGGGGAGGCGGAGCAGCGCATCCGCGAGGATTACCTGCGCATCCTGCGCTATTTCCGCTTCCAGGCGCGCTTCGGTACGCTGCCCGCCGATGCCGAGGCGGAACGCGCCTGCGCGGCGCTGGCGGCGGGGATGAAGGGCCTTTCGCGCGAGCGCATCGGCTGGGAACTGCTCACCCTGCTCGGCCTGCCCGATCCCGCGCCCACAGTGCGGCGCATGGCGGAGCTGGGCGTGCTGGCGCAAGTGTTGCCGGAAGCGACCATGGCCGGCCTCGACAGTCTCGAAGCGCTGATCGCCAGCGAACGGCGCGAAGGGCTGGCTCCCGACGCCCTGCGCCGGCTGGCCGCGCTCCTCCCCGCCGATCCGCCCATGGCCGAACAGGTGGCGGCACGGCTGCGCCTGTCGATCGCCCAGCGCAAGCGGCTGGCCACGGCGGCGGCGCGCGACGGCGCGGTGTCCGATCCGCGCGGCCTTGCCTATCGCCTGGGGCGTGAGGAAGCGCTGGACCGGCTGCTGCTGGCGGGCGCCACCACCACGCCACTCACCGGCTGGGAGGTGCCCCGCTTCCCGCTCAAGGGCGGCGAGATCGTGGCGCGCGGCGTCGGCAAGGGGCCGGACGTGGCGCGCATCCTGCGCGCCGTGGAAGCGCGCTGGATCGCGGAAGGCTTCCCCGACGCGGCGCGCGTGGGCGAACTGCTGGACGCGGAACTGGGCTGA
PROTEIN sequence
Length: 394
MTGHLPAAPWTQRADLAALVAALDPLEQGNCRYVGGAVRDTLLGAPVKDIDMATQLVPQETVARLEAAGIRTIPTGIAHGTVTALLPEGGVEITTLRRDVSTDGRHATVAFSTAWREDAARRDFTINALYADPRTLAVTDFFGGLDDLAARHVRFIGEAEQRIREDYLRILRYFRFQARFGTLPADAEAERACAALAAGMKGLSRERIGWELLTLLGLPDPAPTVRRMAELGVLAQVLPEATMAGLDSLEALIASERREGLAPDALRRLAALLPADPPMAEQVAARLRLSIAQRKRLATAAARDGAVSDPRGLAYRLGREEALDRLLLAGATTTPLTGWEVPRFPLKGGEIVARGVGKGPDVARILRAVEARWIAEGFPDAARVGELLDAELG*