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2019_SCN_bioreactor_t3_biofilm_scaffold_126845_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(1175..2209)

Top 3 Functional Annotations

Value Algorithm Source
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 344.0
  • Bit_score: 695
  • Evalue 2.30e-197
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1) similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 344.0
  • Bit_score: 648
  • Evalue 8.60e-184
Ribonucleoside-diphosphate reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBQ1_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 344.0
  • Bit_score: 648
  • Evalue 3.10e-183

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGCCCAAGCATCACCGCGATCTCGGCCTCAAGGTCTCGACCTCGAACCTCTGCTCGGAAATCACGCTGCCCACGGGGCGCGATCACCTCGGCAACGATCGCACCGCGGTCTGCTGCCTGTCCTCGCTCAACCTCGAAACCTGGGACCAGTGGCACGGCGACAAGCACTTCGTCGAGGACGTGCTGCGCTTCCTCGACAACGTGCTGCAGGACTATATCGACCGCGCGCCCACGGAAATGGCCCCCGCCCAGTATTCGGCGAATCGCGAACGCTCGGTGGGCATGGGCGTGATGGGCTTCCACTCGTTCCTGCAGCAGAAGGGCATCGCTTTCGAATCCGCGATGGCCAAGGCGTGGAACCTCAAGATGTTCCGCCACATCGCCGCCAAGGCGGACGAAGCCAGCCTGCTGCTCGCGCAGGAACGCGGCCCCTGCCCCGATGCGGCGGACATGGGCGTGATGCAGCGCTTCTCGTGCAAGATGGCGATCGCGCCGACCGCGTCGATCTCGATCATCTGCGGCGGCACCTCCGCCTGCATCGAACCGATCCCGGCCAACATCTACACGCACAAGACGCTGTCCGGCTCGTTCGTGGTCGAAAACCCCTATCTCAAGGCGCTGCTCCAGCAGAAGAGCAAGGATTCCGCCAACGTGTGGAATTCGATCCTCGAGAACGGCGGCTCGGTCCAGCACCTCGATTTCCTCTCGCCGGAGGAAAAGGCGGTGTACAAGACCAGCTTCGAGATCGACCAGCGCTGGCTGCTCGAATTCGCGGCGGACCGCACCCCGTTCATCGACCAGGCGCAGTCGCTCAACCTCTATATCCCGGCCGACGTCGACAAGTGGGACCTGATGATGCTCCACTTCCAGGCGTGGGAGAAGGGCATCAAGTCGCTCTATTACCTGCGTTCGAAGTCGGTGCAGCGCGCCGGGTTCGCCGGCGGGGTGGAGGCGGACAACACCGCCGAGGCGCCGAAGATCGAACTCAGCGCCGGCGACCAGACCGACTACGAGGAATGCCTCGCTTGCCAATGA
PROTEIN sequence
Length: 345
MPKHHRDLGLKVSTSNLCSEITLPTGRDHLGNDRTAVCCLSSLNLETWDQWHGDKHFVEDVLRFLDNVLQDYIDRAPTEMAPAQYSANRERSVGMGVMGFHSFLQQKGIAFESAMAKAWNLKMFRHIAAKADEASLLLAQERGPCPDAADMGVMQRFSCKMAIAPTASISIICGGTSACIEPIPANIYTHKTLSGSFVVENPYLKALLQQKSKDSANVWNSILENGGSVQHLDFLSPEEKAVYKTSFEIDQRWLLEFAADRTPFIDQAQSLNLYIPADVDKWDLMMLHFQAWEKGIKSLYYLRSKSVQRAGFAGGVEADNTAEAPKIELSAGDQTDYEECLACQ*