ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_126845_21

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 16884..17477

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z757_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 179.0
  • Bit_score: 216
  • Evalue 1.70e-53
Peptidyl-prolyl cis-trans isomerase, FKBP-type {ECO:0000313|EMBL:GAO54677.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 197.0
  • Bit_score: 375
  • Evalue 4.00e-101
FKBP-type peptidylprolyl isomerase similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 166.0
  • Bit_score: 214
  • Evalue 2.40e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGCACCTTCTCCCGCGCGCCGCGCCCCTCCGCCTTTTTCGTTTCCGCCGGCCGCGCGTTCGCCGCGATAGCCCTTGCGCTGGCGCCGGGATTCGCCTTGGCGGCGGCACCCGCCGCGCCGGCCGCCGCGGGCCAGATCATCCCCCTGCCGCTCAATCCCGTGATTCCGGCCAGCCAGCGCGCCTGCGCCATGAAGACGGCCTCCGGTCTGGGCTATACCGTGCTCAAGCCCGCCGACGGCGCGAAGCCGACCAAGGACGATTTCGTGCTGGTCAACTACATCGGCTATATCGCCGCCACGGGCGCGGTGTTCGATCAGGGGATGCAGGCCGCATTCCCCGTGGGTGGCGTGATTCCGGGCTTTTCCGAAGGGCTGCAACTGCTGCCGCAGGGCGCGATCTACCGCCTGTGCGTGCCGTCGGCGCAAGGCTATGGCGCGCAGGGCGCGGGCGACATCCCGGCGAACGCCGATCTGGTGTTCCAGGTGGAGCTGGTGGACCACAAGTCCGCCGCCGAAGTGGAAGCCATGCGCAAGGCGGCGCAGGCCCAGCAGGGCGCGCCGGGCGCCGCCGCCCCCGCGCCGCAACCCTGA
PROTEIN sequence
Length: 198
MSTFSRAPRPSAFFVSAGRAFAAIALALAPGFALAAAPAAPAAAGQIIPLPLNPVIPASQRACAMKTASGLGYTVLKPADGAKPTKDDFVLVNYIGYIAATGAVFDQGMQAAFPVGGVIPGFSEGLQLLPQGAIYRLCVPSAQGYGAQGAGDIPANADLVFQVELVDHKSAAEVEAMRKAAQAQQGAPGAAAPAPQP*