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2019_SCN_bioreactor_t3_biofilm_scaffold_115787_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 13745..14371

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000348AF23 similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 197.0
  • Bit_score: 155
  • Evalue 4.90e-35
DNA-binding response regulator {ECO:0000313|EMBL:GAO56405.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 175.0
  • Bit_score: 312
  • Evalue 2.60e-82
corR; response regulator protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 203.0
  • Bit_score: 153
  • Evalue 4.00e-35

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGGCGAGGGGGCCGTCGGGGTTACCGTTCGAGCGGGGGCAAGTGTTGTCCAGTCCCAACTTCCTATTGATTGACGACCACGGCTTGTTCAGTGCGGGCGTGGAACTGATTATCCGGCAAAGCTTTCCCGGCGCGCGGCTCGCTTCGTTCGCGGCTCTCGGGACGGCGCTGGAATGGAATGGGGCGATTCCCGACGTCGTGCTGCTCGATATCAATCTGCAAGGCATAGGTGGCATCGAAGCCGTACCGATGCTGCGACTGCGGTGGCCCGGCTGCCGCATCGTGTTCGTCACCTCTGAGCAGGACCAGGCGGTGCTGGCGCGCGCTATGGCCAGCGGCGTCGAGGCCATGGTCGCGAAATCCGAATCGCCCGAACGCCTTGTCTCGGTCCTGCGGCGGCAGGTGCCTGGAATCCAGCCCGAAACCGCTGGCTCGCCGGACTTCAGTCCACGCCAGGTTGAAGTGCTGAAATTGCTGAGCCAGGGCCAGTCGAACAAGGCGATCGGCCGGACTCTGGGTCTTTCCGAATTCACCGTGCGCGGGCATGTTCAGCTGATCCTGAAAACGCTCGGCGTAACCAACCGCACTGCCGCGGTGTTCCGCGCGCGCGAGGTGGGCTTATTGTGA
PROTEIN sequence
Length: 209
MARGPSGLPFERGQVLSSPNFLLIDDHGLFSAGVELIIRQSFPGARLASFAALGTALEWNGAIPDVVLLDINLQGIGGIEAVPMLRLRWPGCRIVFVTSEQDQAVLARAMASGVEAMVAKSESPERLVSVLRRQVPGIQPETAGSPDFSPRQVEVLKLLSQGQSNKAIGRTLGLSEFTVRGHVQLILKTLGVTNRTAAVFRAREVGLL*