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2019_SCN_bioreactor_t3_biofilm_scaffold_127824_2

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 436..1569

Top 3 Functional Annotations

Value Algorithm Source
Beta-lactamase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G2Y9_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 377.0
  • Bit_score: 582
  • Evalue 2.30e-163
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:GAO54245.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 377.0
  • Bit_score: 750
  • Evalue 8.80e-214
beta-lactamase similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 377.0
  • Bit_score: 582
  • Evalue 6.40e-164

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
ATGGCCCGCCCGCGCTTGTCCCATATCCTCCCCCTGCTGCTTGTGCCAGCCTTGATCGGCTGCGGCAGGTCCGGAGACGCGCCCGCACCGCCGCCCCCGCCGCTGTCGGACGCCGCAATGAAGGCGGTGGTCGAAGACCCGGGGACGAATCGCGAAGGCCTGGCCCGCGCGGTCGATGCGCTGTTCACCGACCCGGCAGCGACGGAGACACGCGCGGTGATCGTGATGCGCGGCGGGCGGATCGTGGCGGAGCGCTATGCGCCCGGCTACCACGAGAACACCCGCTTCGTGAGCTGGTCGATGGCCAAGTCGATCACCGGGGTGATGATCGGGATGCTGGTGTCGGACGGGCGGCTGCGGCTGAACGAATCGGCGCCCGTCCCCGCCTGGCAACGCCCCGGCGATCCGCGTGGCGAGATCACGCTGCGGCAGCTGCTGCAGATGCGATCGGGGCTCAAGCATGTGGAGGCGGGCGATCCCGTCTATCAATCCGACGAGGTGCGGATGCTGTTCCTCGACGGGCGCGACGACATGGCGCGCTATGCCGAGGACCAGCCGCTCGACAGCGAACCGGGCAAGACCTTCCGCTATTCGACCGCGACCAGCGTGATCCTGTCCGATCTGGCCGCGCGCGCGCTTGCGCCCGTGCCCGATGCCGACCATCGCCGCCGCGCCGTGGCCGAATATCTGCGCACGCGCCTGTTCGAACCGGCCGGAATGCGTTCGATGCTGCCGGAATTCGACGCGGCGGGCACGCTGATCGGCGGATCGCTGATCCACGGCACCGCGCGCGACTGGGCGCGGTTCGGCGAGTTCCTGCGCAACAAGGGATCGGTGCGCGGCGCGCAGATTATCCCGCGCCAGTGGATCGATTTCATGACCACGCCATCGCCCCGTCAGGCGCAATATGGCGCGCAGATCTGGCTGAACCGTACGCCCAGCGGCAAGGACCGGCCCGCTCTGTTCCCCGATCGCGGCCCGAAGGATCTGTTCGCCTGCATCGGCCACCTGGGCCAGTACGTGCTGGTCTCGCCCAGCCGCAAGCTGGTGGTCGTGCGCTTGGGCAAGACGCCCGATGACAAGCTGGGCGCGGTGACCGGCCACCTCGCCGACATCGTCGACACGTTCAGGTAG
PROTEIN sequence
Length: 378
MARPRLSHILPLLLVPALIGCGRSGDAPAPPPPPLSDAAMKAVVEDPGTNREGLARAVDALFTDPAATETRAVIVMRGGRIVAERYAPGYHENTRFVSWSMAKSITGVMIGMLVSDGRLRLNESAPVPAWQRPGDPRGEITLRQLLQMRSGLKHVEAGDPVYQSDEVRMLFLDGRDDMARYAEDQPLDSEPGKTFRYSTATSVILSDLAARALAPVPDADHRRRAVAEYLRTRLFEPAGMRSMLPEFDAAGTLIGGSLIHGTARDWARFGEFLRNKGSVRGAQIIPRQWIDFMTTPSPRQAQYGAQIWLNRTPSGKDRPALFPDRGPKDLFACIGHLGQYVLVSPSRKLVVVRLGKTPDDKLGAVTGHLADIVDTFR*