ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_127824_12

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(8255..9640)

Top 3 Functional Annotations

Value Algorithm Source
Carboxyl-terminal protease {ECO:0000313|EMBL:GAO54254.1}; EC=3.4.21.102 {ECO:0000313|EMBL:GAO54254.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 452.0
  • Bit_score: 869
  • Evalue 1.20e-249
C-terminal processing peptidase-3 (EC:3.4.21.102) similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 459.0
  • Bit_score: 731
  • Evalue 1.40e-208
C-terminal processing peptidase-3, Serine peptidase, MEROPS family S41A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCB9_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 459.0
  • Bit_score: 731
  • Evalue 4.80e-208

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGGCCCCCTTGAAGCGAAAGTCCCCGATGGCGAAGACCCCGTTCACGAAGACCGTGGCCTCCCTCTTCCGTGCCACCGCGCTCGTGTCGGCCATCGCGCTGATCCCGGTGACGACCGCCGGGCTGGCCGCCGTGGACGCCAAGACCGGCCCCGAATTCACCCGGCTGATGGCGATCTACGAGCGGATCAAGGCCAATTACGTGGAGCCGGTGGACGACGACAAGCTGTTCAAGGGCGCGATCGACGGCATGCTGGCCACGCTCGATCCGCACAGCTCCTATCTCGACGCGCGCGATTTCGAGAACCTGCGCACGCAGACCGATGGTTCCTACGGCGGGCTGGGCCTGTCGGTGACGCTGGAGGACGGCGCGGTCAAGGTGATCGCGCCGATGAAGGGCACGCCGGCCGATCTCGCCGGGATCAAGGCGGGCGACTATATCACCCACCTCGATGGCAAGCTGATCTACGGCGGCTCGCTGGACGACGCGGTGGACCAGATGCGCGGCGAAGTGGGCACGCAGATCCGCCTCACCGTGTTCCGCCCCGGTCGCGACGAGCCGCTTGACCTTACCATCACGCGCCAGGTGATCGAGCTGAAGCCGGTCGAATGGAAGGTGAAGGACAACGTCGGCGTGATCTCCGTATCGAGCTTCAGCGCCAACGTCGGCACGCAGGTCGCTGCCGCCTGGCGCGATATCCGCGCCAAGACGGGCAATCGCCCGGCGGGGCTGATCCTCGATCTGCGCGGCAATCCCGGCGGACTGCTGGACGAAGCCGTCTCGCTGTCGGACCTGTTCCTCGAAAAGGGGCCGATCGTCTCGCAGCGCGGCCGCTATGCCCGCGACAACGAGGTGTACAACGCCACGCCGGGCGATATCGCCAAGGGCGTGCCGATGATCGTGCTGATCGATCAGGGGTCGGCGTCCGCTTCGGAAATCGTCGCCGGCGCGATGCAGGACCAGCACCGCGCGGCGATCATGGGCGAGCGCAGCTTCGGCAAGGGCAGCGTGCAGACGCTGATCCCGCTGACGCGCGACACCGCGCTCAAGCTGACGACGGCGCGCTATTACACCCCCTCGGGCCGTTCGGTGCAGGAAGGCGGCATCGATCCCGACGTGCGCGTGCCGCAGATTTCCGATCCCGACATGCGCAAGCGCGCGCTGCGCTCCTATCGCGAAAGCGATCTGCGCGGGCACCTGATCAACGAGCTGAAGGACGACAAGGATCTCGAGACCGACAAGGGCGAGGATCCGCGCTTCAAGATGACGGCCGAGGAACTGAAGGCCAAGGGCATCGACGACTTCCAGCTCTATTACGCGATGCAGACGCTGGAGAGGACCGCGCCGCAGGCGCTGGCCGTAAAGGCATCGGCGGGAAGGCGCTGA
PROTEIN sequence
Length: 462
MAPLKRKSPMAKTPFTKTVASLFRATALVSAIALIPVTTAGLAAVDAKTGPEFTRLMAIYERIKANYVEPVDDDKLFKGAIDGMLATLDPHSSYLDARDFENLRTQTDGSYGGLGLSVTLEDGAVKVIAPMKGTPADLAGIKAGDYITHLDGKLIYGGSLDDAVDQMRGEVGTQIRLTVFRPGRDEPLDLTITRQVIELKPVEWKVKDNVGVISVSSFSANVGTQVAAAWRDIRAKTGNRPAGLILDLRGNPGGLLDEAVSLSDLFLEKGPIVSQRGRYARDNEVYNATPGDIAKGVPMIVLIDQGSASASEIVAGAMQDQHRAAIMGERSFGKGSVQTLIPLTRDTALKLTTARYYTPSGRSVQEGGIDPDVRVPQISDPDMRKRALRSYRESDLRGHLINELKDDKDLETDKGEDPRFKMTAEELKAKGIDDFQLYYAMQTLERTAPQALAVKASAGRR*