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2019_SCN_bioreactor_t3_biofilm_scaffold_149803_6

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 5240..6124

Top 3 Functional Annotations

Value Algorithm Source
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7D9_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 299.0
  • Bit_score: 531
  • Evalue 4.70e-148
Uncharacterized protein {ECO:0000313|EMBL:GAO55714.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 294.0
  • Bit_score: 589
  • Evalue 2.00e-165
Orn/DAP/Arg decarboxylase 2 similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 299.0
  • Bit_score: 531
  • Evalue 1.30e-148

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGCGCGTATTCAGCCTCGATTCGCTCGAGGAACTGGAGAAGATCAAGGCGGCCACGGCTGACGACGCCGGCAACGCTGCCGAAGACCTCACGCTGTGCGTGCGCCTGCGCGTGTCGTCGGAATATTCGGAACTCAGCCTCGCCTCGAAGTTCGGCTGCGACCTGACGGACGCGGCGGAACTGCTTCAGGCCACGCGCCAGGCGGCGGATTCGCTGGGCGTGTGCTTCCATGTGGGCAGCCAGGCGATGAGCCCCCATGCCTATGTGCAGGCGTTGGAAAAGGCGCGCGCGGCGATCGTCGATGCCTCGGTCCTCGTCGACATCATCGATGTGGGCGGCGGTTTCCCGTCGATCTATCCGGGCATGGAGCCGCCGCCGCTGGAGGACTATTTCGGCGTCATCGACCGCACCTATGAATCGCTGCCGGTGTCCTATTCGGCCGAACTGTGGTGCGAGCCGGGCCGGGCGCTCTGCGCGGAATACAACTCGATGATCGTGCGCGTCGAAAAGCGCCGCGGCGATGAGCTGTACATCAACGATGGCGCCTATGGCGCGCTGTTCGACGCCGCGCATGTCGGCTGGCGCTTCCCGGTGAAGCTGCTGCGCGAAGAGGCTTCGGACGAGTTCGTGCCGTTCAGCTTCTATGGCCCGACCTGCGACGACATGGACCACATGGACGGTCCGTTCGAACTGCCGGCGGACATCAAGGCGGGCGACTACATCGAGATCGGGATGCTCGGGGCCTATGGCGCGGCGATGAAGACCGCGTTCAACGGCTTCGGCGCGACCGAGGTGTTCGAGGTTTCGGACGAGCCGATGGCCAGCCAGTATCGTGGCGACCGGCGCGACCCGCGCGTTTCGGACAACGTCGTCTCGCTGCGCTGA
PROTEIN sequence
Length: 295
VRVFSLDSLEELEKIKAATADDAGNAAEDLTLCVRLRVSSEYSELSLASKFGCDLTDAAELLQATRQAADSLGVCFHVGSQAMSPHAYVQALEKARAAIVDASVLVDIIDVGGGFPSIYPGMEPPPLEDYFGVIDRTYESLPVSYSAELWCEPGRALCAEYNSMIVRVEKRRGDELYINDGAYGALFDAAHVGWRFPVKLLREEASDEFVPFSFYGPTCDDMDHMDGPFELPADIKAGDYIEIGMLGAYGAAMKTAFNGFGATEVFEVSDEPMASQYRGDRRDPRVSDNVVSLR*