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2019_SCN_bioreactor_t3_biofilm_scaffold_144631_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2129..2620)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMP6_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 154.0
  • Bit_score: 113
  • Evalue 1.70e-22
Transcriptional regulator of marR family {ECO:0000313|EMBL:GAO56914.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 155.0
  • Bit_score: 297
  • Evalue 8.80e-78
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 154.0
  • Bit_score: 113
  • Evalue 4.70e-23

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGGAGACTTGATCGAGACGGGCATGGCGGAAAATGGTGGCGAACATGATGCCCTCGATCTGCTCGAGTACGCGCCGTATCTGTTCAGATCGATCGCCAACCGGCTTGGGCAAGCGGATTCGAGTTATCTCGCGCAGAATTTCGGTGTGGGGTTGAACGAGTGGAGTTGCATCGCGCTTCTGGCTCTTGAACCTAATATTCCGGCCACGCGGATCTGCGACGTCAGCGGGTTCGACAAGGGCGTGATCAGCCGCAGCATCAATTCGCTGGAGACAAAGGGACTTGTCCGGGGCGCCCTGGCGCCGAACAGAAGCCGTCTGCGGCTGATCAACCTGACGCCGGATGGCTGGCGACTTTACCACGAAACGCGAGCCTACGCCCGGGAGCGGGAAGAGCGGCTTCTGGCAGGATTGTCCAAGGCGGAACGCGTGAATCTCACGCGCATGCTGAACGTCGTTCATGCGAATATGCGCAAGTCCGAAGGTTCCTGA
PROTEIN sequence
Length: 164
MGDLIETGMAENGGEHDALDLLEYAPYLFRSIANRLGQADSSYLAQNFGVGLNEWSCIALLALEPNIPATRICDVSGFDKGVISRSINSLETKGLVRGALAPNRSRLRLINLTPDGWRLYHETRAYAREREERLLAGLSKAERVNLTRMLNVVHANMRKSEGS*