ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_144631_4

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 2777..3841

Top 3 Functional Annotations

Value Algorithm Source
Vanillate O-demethylase oxygenase subunit {ECO:0000313|EMBL:GAO56915.1}; EC=1.14.13.82 {ECO:0000313|EMBL:GAO56915.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 287.0
  • Bit_score: 571
  • Evalue 6.90e-160
Putative iron-sulfur protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INF8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 347.0
  • Bit_score: 518
  • Evalue 4.90e-144
(2Fe-2S)-binding protein similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 343.0
  • Bit_score: 518
  • Evalue 8.10e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGAAGTACGTGCGAAATGCTTGGTACGTGGCCGGCTGGGCCATGGATCTGGAGGAAGCCAAGCCGCTCGCAATCAGCATTCTCGGCGAACCCATTGTCCTCTATCGCAGCGGTGGCGTTCTCGCGGCGCTCGAAGACCGGTGCGTTCACCGGCTGGCTCCACTATCCCTCGGCCGGTGCGAGGCCGCGAACCTCCGGTGCATGTACCACGGCCTGCTGTTCGCCCCGGACGGGAAAGTCATCGAGATCCCGGGACAGGACGTCGTCCCCCCGCAAGCCCGGGTCAAAAGCTATCCGGTAACCGACCGGCACAGCTGGATCTGGGTGTGGATGGGCGATCCCGCCAAGGCCGATGAAGCCCTGATCCCGCCGGCGGTCGGCTTCGACGATCCCGATTACATCCTGGGCCGTGGCCAGCTGGACTATGCCGCGGAGGCCCGCCTCATCAACGACAACCTGCTCGATTTCAGCCACCTGACTTTTGTCCATGCTCAAAGTTTCGGGTCCGATCCCGATTTCGCGCGGGTTCTGCCGAGCATTACTCCCCTGCCCCGTGGCATCCGGTATCTGCGCTGGATAGAGAACACCTTCGGGTCATCGACACGGAAGACGGACGTGCCGATGGATAACTTCATGGCCTACGACTACCTGCTGCCCGGCATTCTGCTGATGCAGACCGGTGTGTTTCCGCTCGGCACGGCCAAGGCTTGCGATTTCGGATACCCCGACCTCAGCAAGGCGGTGGGCAGCCTCTCTTTCACCAGCCAGGCGGTCACCCCGGTGACCGAGAAGACAGCCCGTTATTTCTTCTCGTGGGGGCCGCACCGGAACTACGGCAACGAAGCGACCCGCGATGGCATGATGCGCGTGGCCGCGCAGGCCTTTGCCGAAGACAAGACGATGATCGAGGCGCAGCAACGCGTGATCGATGGATCGCCGGACGCGCAGGTGATGCCGACCGCGCACGACAAGGGGGTAACGCTGTTCAACCGCCTCATCGCAGCGATGGTGAAGCAAGAGCAGGAAGAGCAGCTCTCCAAGGATCTCGAAAGGACAGTATCATGA
PROTEIN sequence
Length: 355
MKYVRNAWYVAGWAMDLEEAKPLAISILGEPIVLYRSGGVLAALEDRCVHRLAPLSLGRCEAANLRCMYHGLLFAPDGKVIEIPGQDVVPPQARVKSYPVTDRHSWIWVWMGDPAKADEALIPPAVGFDDPDYILGRGQLDYAAEARLINDNLLDFSHLTFVHAQSFGSDPDFARVLPSITPLPRGIRYLRWIENTFGSSTRKTDVPMDNFMAYDYLLPGILLMQTGVFPLGTAKACDFGYPDLSKAVGSLSFTSQAVTPVTEKTARYFFSWGPHRNYGNEATRDGMMRVAAQAFAEDKTMIEAQQRVIDGSPDAQVMPTAHDKGVTLFNRLIAAMVKQEQEEQLSKDLERTVS*