ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_151352_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2..142)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-binding ATPase YchF n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z912_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 100
  • Evalue 3.20e-19
ychF; GTP-dependent nucleic acid-binding protein EngD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 100
  • Evalue 9.20e-20
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 100
  • Evalue 4.50e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 141
ATGGGTTTTCGTTGCGGGATCGTCGGTCTGCCAAACGTCGGCAAGTCGACGCTGTTCAACGCGCTGACCGAGACGCAGGCGGCGCAGGCGGCGAACTATCCGTTCTGCACGATCGAGCCGAACGTCGGCAACGTGGGCGTG
PROTEIN sequence
Length: 47
MGFRCGIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGNVGV