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2019_SCN_bioreactor_t3_biofilm_scaffold_151352_2

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 276..2291

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6G6_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 498.0
  • Bit_score: 470
  • Evalue 1.70e-129
Uncharacterized protein {ECO:0000313|EMBL:GAO56454.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 502.0
  • Bit_score: 911
  • Evalue 6.90e-262
TPR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 498.0
  • Bit_score: 470
  • Evalue 4.80e-130

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2016
ATGAGAAACACGTTGATCCTGCCCGCACTGCTCGTTCTCGCCGCCTGCGGTTCGGAAACGCCAGAGCAGCATTTCGACCGGGCACAAGCCGCCTTCAAGGCGGAGGACTATCGCACGGCCCGCAAGGAACTGGGCGAAGCGGTTTCGGCCGCGCCCGATGATGCCCGGATTCTCGATCTGCTGGCGCGGGTGCAATTGCGCCTGGGCGATGGCGAGGGCGCGCAGGCGACGCTCGCGCGCCTGGAAGCCGCAGGCGGGAAGGGGGCCGAGATAGCGCGGATGAAGGCGGACGCGGCCTTGCTGCGCGGGCAGGCCAGCGAAGCGCTTTCGCTGCTGGGCAACGATAGCCATCCGGATGCATGGCGCATCCGCGCGGCGGCCCTGCTTGCGAACAAAGATGAGACCGGGGCGCTCGAAGCTTATCGCAAGGGGCTTGCCGCCGGCGGTGATGCACGCCTGGTGCGTGACTATGCCCGGTTCCTGCTGGATTCGCAGGATATCGCCGGGGCCGAAGCGCAACTGGCCGATTTGCGCCGTCGAAGCCCTGACGCGCTCGATACGTTGATGCTGGCGGGCGATATCGATGCGCAGGCGAACCGTTGGGACGGCGCCCTGGCCGCGTACAAGCGGGCGCAGTCGCTTTATCCCACGCGGCCCGAGCCATTGCTCGCGCAGGCCGATGCGGCCGACCAGCAAGGCAAGCTGGACGAGGCCGAGGCGCTGGTGGCCCGTGCCACCGATGTCGCGCCCGATAGCGGCGACGTGCTGCGGATGCGCATCCAGATCGCGGCCGAAAGGGGCGATTGGGAGCGGGTACGGTCCATGCTCGCCCCGCGCGAAAGCAGCCTGGAGGCGCGCTCGCCCGAAGGGCTGGCCTATGCCGAAGCCTTGCTTCGCCTCGGGCGGGCCGAGCAAGCGCGGGCGATCTATGCCAAGGCCTTGCTGCTTTCCCCGCAGAACCCGTTTGCAAGGCTGATGCTGGCGGAAGCGCAACTCGCGACCGGCGATGCGGCCACGGCCTATGCCACGGTCAAACCGCTGGCGGACAGCGCCATGGCCGGGCCGCGCGAACTGGAGCTTGCGGAAAAGGCGGCGCGCGCGGCCGGCGATCCGGCAGCCGATACGCTGAAGGCGCGCTTGCAGTCGGGCGATCTGCGCCGAACGCAGCAACTGGCCGCCAGCGGGCAGGCGGCGATGGCGCGGGGGGACTGGAACGCGGCGATCATGGCGTACCAGCAAGTCTCCGGCTACCAAGCCGATGCGGATGTGCTCAAGCGGCTGGCGTTCGCGGCCTCGCAGGCCGGGCGCAACGCCGAAGCGATCGGCTTCGCGGACAAGGCGCTGGCCTTGCAACCCTCCAACGCCGACATGATCCACATGGCGGGGCTGGCGCGGTTAAGGGCCGGGACGGACCGCGAAAAGGCGGTGGCCTATCTCGAACAGGCTTTGCGGGCAGACCCCGCCAACCGCCTCTTCCGGAACGATCTCGCCCGCGCGCAAGTGGTCCGGCGCGGCCGAACCCGTGGGGCGTGCCCTAATTCAGTGCGGTCAGGCCTTGCGGCGCTGACGGCGCGCAAAGCCCAGGCCGATCAGGCCCATCGCCATCATGCCCAGCATGCCGGGTTCGGGAACCGCCGTACCGCCGGACGAGGTGCTGCCACCGCCCGACGAAGTCGACGAGGTAGAGGTGCTGCCGCCAGAGGACGTGGAGGTGCTGCCACCCGAGGAGGTGCTGCCGCCGGACGACGTGCTGCCGCCGCTGGTGGACGACGTCGACGAGGACGACGACGAACCGCCGCACGACTTGGAGCCGGCGCTGTGGCCGCAATTGCAATAGTGGGTGTGACCGAAAGTCGCGTGCGCCGGCGTGGCGAACATCGCGGACGTCGCCAGCGCGGCGAGGATGACAGTGGAACGCTTCATGGTTTGGCCCCCTTTGAAAGCGGTACGAATGGTTCACGCCATTCTTCGCAATTGCCGTGCCAAACGGGGAATCCTGCAGGGTATGCTGGTTAA
PROTEIN sequence
Length: 672
MRNTLILPALLVLAACGSETPEQHFDRAQAAFKAEDYRTARKELGEAVSAAPDDARILDLLARVQLRLGDGEGAQATLARLEAAGGKGAEIARMKADAALLRGQASEALSLLGNDSHPDAWRIRAAALLANKDETGALEAYRKGLAAGGDARLVRDYARFLLDSQDIAGAEAQLADLRRRSPDALDTLMLAGDIDAQANRWDGALAAYKRAQSLYPTRPEPLLAQADAADQQGKLDEAEALVARATDVAPDSGDVLRMRIQIAAERGDWERVRSMLAPRESSLEARSPEGLAYAEALLRLGRAEQARAIYAKALLLSPQNPFARLMLAEAQLATGDAATAYATVKPLADSAMAGPRELELAEKAARAAGDPAADTLKARLQSGDLRRTQQLAASGQAAMARGDWNAAIMAYQQVSGYQADADVLKRLAFAASQAGRNAEAIGFADKALALQPSNADMIHMAGLARLRAGTDREKAVAYLEQALRADPANRLFRNDLARAQVVRRGRTRGACPNSVRSGLAALTARKAQADQAHRHHAQHAGFGNRRTAGRGAATARRSRRGRGAAARGRGGAATRGGAAAGRRAAAAGGRRRRGRRRTAARLGAGAVAAIAIVGVTESRVRRRGEHRGRRQRGEDDSGTLHGLAPFESGTNGSRHSSQLPCQTGNPAGYAG*