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2019_SCN_bioreactor_t3_biofilm_scaffold_151352_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2362..2931)

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 189.0
  • Bit_score: 385
  • Evalue 2.80e-104
peptidyl-tRNA hydrolase (EC:3.1.1.29) similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 187.0
  • Bit_score: 344
  • Evalue 1.10e-92
Peptidyl-tRNA hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PTH_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 187.0
  • Bit_score: 344
  • Evalue 4.00e-92

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGCAAGTCTGGGTCGGGCTGGGCAATCCGGGGCCGCAATATGCGCTGCACCGCCACAATGTCGGCTTCATGGCGCTCGACACCATCGCCGAAGTGCACTCCTTCGGCCCGGTGCAGAAGAAGTTCCAGGGCTGGGTGCATGAAGGCCGGATCGGCGGGGCGAAAGTGCTGCTGCTGAAGCCGGCGACCTTCATGAACGAAAGCGGCCGCGCGGTGGGCGAAGCGCTGCGCTTCTACAAGCTGGGCACCGATGCGCTGACGGTGTTCCACGACGAGCTCGATCTCGCCCCGTTCAAGGTGAAGGTGAAGACCGGTGGCGGCACCGCCGGGCACAACGGCTTGCGCTCGATCGACAAGCACCTCGGACCCGATTTCCGCCGCGTGCGGCTGGGCATCGGCCACCCCGGCCACAAGGACCGCGTGACCGGGTACGTTCTCGGCAATTTCGCCAAGGCGGAGCAGGACGATCTCGTCGACATGCTCGGCGCGATCGCTTCGGAAGCGGAATGGCTGGCCAAGGGCGACGACGTCCGCTTCATGAGCGATGTGGCGCTACGGCAAGCAGGTTAA
PROTEIN sequence
Length: 190
MQVWVGLGNPGPQYALHRHNVGFMALDTIAEVHSFGPVQKKFQGWVHEGRIGGAKVLLLKPATFMNESGRAVGEALRFYKLGTDALTVFHDELDLAPFKVKVKTGGGTAGHNGLRSIDKHLGPDFRRVRLGIGHPGHKDRVTGYVLGNFAKAEQDDLVDMLGAIASEAEWLAKGDDVRFMSDVALRQAG*