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2019_SCN_bioreactor_t3_biofilm_scaffold_151352_4

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(3111..3719)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RL25_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 202.0
  • Bit_score: 360
  • Evalue 7.50e-97
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 202.0
  • Bit_score: 398
  • Evalue 4.50e-108
50S ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 202.0
  • Bit_score: 360
  • Evalue 2.10e-97

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAGCGAGACGCTTACGCTGTCGGCCGAGACGCGCGATCGGGCTGGCAAGGGAGCCTCCCGTGCACTGCGTCGCGAAGGCCGCACTCCCGCCGTGATCTACGGCGGCAACGAGGATCCGGCCGCGATCCACGTCGGGGAAAAGGAACTGGTCAAGGCGCTTGGCACCGGTCACTTCTTCAACTCGATCGTCGAACTCACCGTCGGCGGCAAGACCGTCCGCACGCTGCCCAAGGACGTTGCGTTCCATCCGGTTTCGGACCGTCCGCTGCATGCCGACTTCCTGCGCCTTTCGGCCGACCACGCCGTTCACGTGAACGTGCCGGTGGTCTTCGCCAACGAGGAAAAGTCGCCCGGCCTCAAGAAGGGCGGCGTCCTCAACGTGGTCCGTCACGAACTCGAACTGGTCTGCGCGCCGGATTCGATCCCCGATGACATCGTGGTCGACGTGACCGGCTTCGAAGTGGGCGATTCGATCCACATCAGCTCGGTGACGCTGCCGGCCGGCGTGAAGACGGCGATCACCGACCGCGACTTCACCATCGCCACGATCGTCGCGCCCTCCTCGCTCAAGAGCGAAGAAGGCGATACGACCAAGACCGAAGCCTGA
PROTEIN sequence
Length: 203
MSETLTLSAETRDRAGKGASRALRREGRTPAVIYGGNEDPAAIHVGEKELVKALGTGHFFNSIVELTVGGKTVRTLPKDVAFHPVSDRPLHADFLRLSADHAVHVNVPVVFANEEKSPGLKKGGVLNVVRHELELVCAPDSIPDDIVVDVTGFEVGDSIHISSVTLPAGVKTAITDRDFTIATIVAPSSLKSEEGDTTKTEA*