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2019_SCN_bioreactor_t3_biofilm_scaffold_151352_7

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 5876..6793

Top 3 Functional Annotations

Value Algorithm Source
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 305.0
  • Bit_score: 638
  • Evalue 3.00e-180
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14) similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 304.0
  • Bit_score: 580
  • Evalue 1.50e-163
Glycine--tRNA ligase alpha subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6H2_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 304.0
  • Bit_score: 580
  • Evalue 5.30e-163

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGCCGATCACACCCAAGCATCCCCCACGGGGCCGCTCAGCCTGCAGGACATCATCCTGCGCCTTCACGCGTTCTGGAGCGAGCAGGGCTGCCTGATCCTCCAGCCTTACGACATGCGCATGGGCGCGGGTACGTTCCATCCCGCCACCACGCTGCGCGCGCTGGGTCCGCAGCCGTGGAACGCCGCGTTCGTGCAGCCGTGCCGCCGCCCGACCGACGGCCGCTATGGCGAGAACCCGAACCGGCTCCAGCACTATTACCAGTACCAGGTGATCCTGAAGCCCAGCCCGGAAAACCTGCAGGAGCTTTATCTCGAAAGCCTGCGCGCCATCGGCGTGGATCCGCTGCTGCATGATATCCGCTTCGTGGAGGACGACTGGGAATCGCCCACGCTCGGCGCCTGGGGCCTGGGCTGGGAAGTGTGGTGCGACGGGATGGAAGTCACCCAGTTCACCTATTTCCAGCAGATGGGCGGCTTCGATTGCAAGCCGGTGGCGGGCGAGCTGACCTATGGGCTGGAGCGCCTGGCGATGTACATCCAGGGCGTCGACAACGTCTATGATCTGGCGTTCAACAGTCACGGCGTGACGTATGGCGACGTGTTCCTCGAGAACGAGCGCGAGATGTCGAAGTGGAACTTCGAGGTTGCCGATACCGACAGCCTGTTTGAAGGCTTCCGCCGCGCCGAGGAGGAATGCCGCCGCTCGCTGGATGCCGGCGTGCCGATCGCGGCCTATGAACAGGCGATCGAGGCAAGCCACCTGTTCAACCTGCTGCAGGCGCGCGGCGTGATCTCGGTACAGGAACGCGCCAGCTACATGGGCCGCGTGCGCGATCTCGCGCGGGGATCGTGCGAGGCCTACATGGACAAATTCAAGGACGAATGGGCGCAGGCCTATCCGGGGTGGACGGCATGA
PROTEIN sequence
Length: 306
MADHTQASPTGPLSLQDIILRLHAFWSEQGCLILQPYDMRMGAGTFHPATTLRALGPQPWNAAFVQPCRRPTDGRYGENPNRLQHYYQYQVILKPSPENLQELYLESLRAIGVDPLLHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVTQFTYFQQMGGFDCKPVAGELTYGLERLAMYIQGVDNVYDLAFNSHGVTYGDVFLENEREMSKWNFEVADTDSLFEGFRRAEEECRRSLDAGVPIAAYEQAIEASHLFNLLQARGVISVQERASYMGRVRDLARGSCEAYMDKFKDEWAQAYPGWTA*