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2019_SCN_bioreactor_t3_biofilm_scaffold_163755_1

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2..808)

Top 3 Functional Annotations

Value Algorithm Source
methyl-accepting chemotaxis protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6AE11 similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 265.0
  • Bit_score: 283
  • Evalue 1.50e-73
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:GAO56192.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 269.0
  • Bit_score: 508
  • Evalue 4.10e-141
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 264.0
  • Bit_score: 282
  • Evalue 9.70e-74

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
GTGGACGACAAGCGACAGGATTTCAGCAGGAAGATTGCCTTCTTCGCCATCGGCGAGAAGGATCAGACCCATTTCCCCTCGATTTTGCGGGCGTTGGCCAAACATGCGCCGCCGGCGCTGGACCGGCTTTACGATGGCATCGCGGCCGAACCCGCGCTTTCGGGATTCTTCAGTTCGCAGGCGATGGTGGAACACGCCAAGCAGAAGCAGCTCGATCACTGGCGCCAGATGTTCGAAGGCCGGCCCGATGAGGCCTACAACACGCGTGCGCGCCGGATCGGCAACATTCATGCGAAGATCGGGTTGGAACCGGGCTGGTACATCGGCGCCTATGCCGGGGTGCTGGCGGATGTGATCGTGGCGATGGCGGCGGGTTCCGGCCTTGGCGTGACCGGATCGCGCAAGCTGGGCCAGGCGATCAGCGCCATGTTGAAGATGGCCATGCTCGACATGGAAATCGCGCTTTCGACCTATTTTGATGTCGCCAACGAGGCGTTGCGCAGTTCCGTGATCGACAAGCTGGGCGATTCCCTGCGTAAGATGACCGACGGCGATTTCACCGCCGCGCTGACCGATTTGCCGGGCGAGTTCGTCGAGCTTCAGAACGATTTCGAAACGATGCGCGAAAAGGTGCGCGTGGCGCTTTCCGCTGTCTCCGAAACCGCCCAGAACGTTGACCTTGGCGCGCGGGAAATCCGCGAGGCATCACACGATCTGGCGACGCGCACCGAAGAGCAGGCCGCTTCGCTGGAAGCGGCGTCCGCTTCGATGACGACGCTGGCGAGCAGCGTGCAGACCACCGCCGAA
PROTEIN sequence
Length: 269
VDDKRQDFSRKIAFFAIGEKDQTHFPSILRALAKHAPPALDRLYDGIAAEPALSGFFSSQAMVEHAKQKQLDHWRQMFEGRPDEAYNTRARRIGNIHAKIGLEPGWYIGAYAGVLADVIVAMAAGSGLGVTGSRKLGQAISAMLKMAMLDMEIALSTYFDVANEALRSSVIDKLGDSLRKMTDGDFTAALTDLPGEFVELQNDFETMREKVRVALSAVSETAQNVDLGAREIREASHDLATRTEEQAASLEAASASMTTLASSVQTTAE