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2019_SCN_bioreactor_t3_biofilm_scaffold_163755_2

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(962..2089)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 375.0
  • Bit_score: 718
  • Evalue 3.70e-204
DNA polymerase III subunit beta (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 375.0
  • Bit_score: 686
  • Evalue 4.10e-195
DNA polymerase III subunit beta n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F0_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 375.0
  • Bit_score: 686
  • Evalue 1.40e-194

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGAAGGCGACGATCGAACGCGCAACCCTGCTGCGATGCCTGTCCCACGTGCAATCGGTGGTGGAACGGCGCAACACGATCCCGATCCTGTCGAACGTGCTGATCGAGGCCGCGCCGGATGCCACGGTGCGCCTGATGGCCACGGACCTTGATCTGCAGATCGTGGAAACCATGCCCGCCGCCGCTGTCGACCAGCCCGGCGCGATCACCGTATCGGCGCATCTGCTGTTCGATATCGCGCGCAAGCTGCCCGACGGCAGCCAGGTGAGCCTGGAAACGGCGGACAACCGCATGATCGTGAAGGCCGGGCGCAGCCGCTTCCAGCTGCCCACGCTGCCGCGCGACGATTTACCGGTTATCGTGGAAGGCGATCTGCCGACCAGCTTCGAAATTCCGGCGCGCGTGCTGGCCGAACTGATCGACCGCACCCGCTTCGCGATCTCGACCGAAGAGACGCGGTACTATCTCAACGGGATATTCCTGCACGTTTCGGACGAGGCGCAGCCCGTGCTGAAGGCGGCGGCGACCGACGGGCACCGTCTGGCGCGCTACACGCTGCAGCGCCCGGATGGCGCCGAAGGGATGCCGGACGTGATCATCCCGCGTAAATGTGTGGGCGAGCTGCGCAAGCTGCTGGAGGAAGTGCTCGATACCAGCGTGCTGATCGATCTTTCCGCCAGCAAGGTGCGCTTCACGCTGGGCGGCGAGAACGGGGTGGTGCTGACCAGCAAGCTGATCGACGGTACGTTCCCCGATTACAGCCGCGTCATCCCCACCGGCAACGACAAGCTGCTCCGGCTCGATCCGCGCAGCTTCTTCGAAGGCGTTGACCGTGTGGCGACGATCGCCACCGAAAAGACCCGCGCGGTGAAGATGGCGCTGGAAACCGACCGCGTGACACTGTCGGTCACCAGCCCGGACAACGGCACCGCAGCCGAAGAATTGCCGGCGGACTATACCGCGGAAGGGTTCGAGATCGGCTTCAACGCCAACTACCTCAAGGACATCCTGAGCCAGATCGACGGCGATACGGTGGAACTGCACCTGGCCGATGCCGGCGCGCCCACGCTGATCCGCAAGGACGAGAAAAGCCCGGCGCTCTACGTGCTGATGCCGATGCGCGTCTGA
PROTEIN sequence
Length: 376
MKATIERATLLRCLSHVQSVVERRNTIPILSNVLIEAAPDATVRLMATDLDLQIVETMPAAAVDQPGAITVSAHLLFDIARKLPDGSQVSLETADNRMIVKAGRSRFQLPTLPRDDLPVIVEGDLPTSFEIPARVLAELIDRTRFAISTEETRYYLNGIFLHVSDEAQPVLKAAATDGHRLARYTLQRPDGAEGMPDVIIPRKCVGELRKLLEEVLDTSVLIDLSASKVRFTLGGENGVVLTSKLIDGTFPDYSRVIPTGNDKLLRLDPRSFFEGVDRVATIATEKTRAVKMALETDRVTLSVTSPDNGTAAEELPADYTAEGFEIGFNANYLKDILSQIDGDTVELHLADAGAPTLIRKDEKSPALYVLMPMRV*