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2019_SCN_bioreactor_t3_biofilm_scaffold_163755_5

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(3695..4087)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GPW7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 127.0
  • Bit_score: 177
  • Evalue 5.80e-42
Uncharacterized protein {ECO:0000313|EMBL:EJL24823.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 127.0
  • Bit_score: 177
  • Evalue 8.10e-42
Fe3+ hydroxamate ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 130.0
  • Bit_score: 164
  • Evalue 1.90e-38

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
GTGTTGGACATTAATGACGTCAGCGCCGCCGTGGTGGGGGAAGCGATCAAAGTTCATCGGGAACTTGGGCCGGGCCTGCTTGAAAGCGTTTATGAAGTGGTACTTGCGGCAGGACTGCAACGCTCTGGCTTCAAGGTGGCAAGGCAGGTTCCTGTCGCGATCGAATATGATGGTTTAAGGCTTGAAGGGGCATTCCGTGTCGATCTTCTGGTTGACGATCGTCTGGTCGTGGAGATCAAGGCAGTCGAGCAATTGACCAAGGTCCATGCGAAGCAGTTGCTGACCTATCTACGGTTGATGAGGCAGCCCGTCGGGCTGCTTCTGAACTTCTCTGGTCTGACAATGAAAGAAGGCATTCGCAGGCTCGTGAACGACTATCGGTCAGCCGGCTGA
PROTEIN sequence
Length: 131
VLDINDVSAAVVGEAIKVHRELGPGLLESVYEVVLAAGLQRSGFKVARQVPVAIEYDGLRLEGAFRVDLLVDDRLVVEIKAVEQLTKVHAKQLLTYLRLMRQPVGLLLNFSGLTMKEGIRRLVNDYRSAG*