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2019_SCN_bioreactor_t3_biofilm_scaffold_164504_6

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2510..3118)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ECA7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 191.0
  • Bit_score: 213
  • Evalue 1.10e-52
GGDEF/PAS/PAC-domain containing protein {ECO:0000313|EMBL:GAO54039.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 202.0
  • Bit_score: 376
  • Evalue 1.40e-101
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 191.0
  • Bit_score: 213
  • Evalue 3.20e-53

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGACTGCGGTTGGCATCGTCGGCCTCTTCATCCTGCTGCGGCAGGAGCGCGATTCGGCGATGACCCGCGCCGAGGAAATGGAAGGCATCGTCGGGCGCGATCCGCTGACCGGGCTCAACAACCGCTTGTCGATCGAGCGTCGGTTCGATGAACTGCTGTCAGGCGGCTTTCGCACCATGGCTGTGATCGATCTCGATCACTTCAAGGACGTCAACGATACCCATGGTCATGCCACGGGCGATGCGGTGCTGAAGGCCACCGCGCGCGCGATCGCCGGGGATCGCGATACCCACGCGATCCGCATGGGGGGCGAGGAGTTCATGCTGCTGCTGCGGGGGCCGTTCGCCGCCGAACGCGCCGAACGCGCGCGCCGGGCGATCACCGCGCGCGTGGCGGCCGAAGTGGCCGGGCTGGACCGGATCGTCACCGCCAGCATGGGGCTGATCGAATACGATGGCGACAACCCCGACCTGGCGGCATTCGACAGCCTCTATGCCCACTGCGACCGCCTGCTCTATGAAGCCAAGCGCAGCGGCCGCAACCGCACGGTGCGCGATCTGCTGGCGGTCCAGACGGCCGAGGCGCTGGTGCAGGCGGTGTCGATTTAG
PROTEIN sequence
Length: 203
VTAVGIVGLFILLRQERDSAMTRAEEMEGIVGRDPLTGLNNRLSIERRFDELLSGGFRTMAVIDLDHFKDVNDTHGHATGDAVLKATARAIAGDRDTHAIRMGGEEFMLLLRGPFAAERAERARRAITARVAAEVAGLDRIVTASMGLIEYDGDNPDLAAFDSLYAHCDRLLYEAKRSGRNRTVRDLLAVQTAEALVQAVSI*