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2019_SCN_bioreactor_t3_biofilm_scaffold_164504_8

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(4259..4660)

Top 3 Functional Annotations

Value Algorithm Source
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 133.0
  • Bit_score: 260
  • Evalue 9.70e-67
L-alanine dehydrogenase (EC:1.4.1.1) similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 132.0
  • Bit_score: 236
  • Evalue 4.00e-60
Alanine dehydrogenase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I245_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 132.0
  • Bit_score: 237
  • Evalue 4.80e-60

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
GTGCTGGTGCCGGGCGCCGCTGCGCCCAAGCTGGTCACGCGCGACATGCTGTCCACGATGAAGCCCGGCGCCGTGCTGGTGGACGTGGCGATCGACCAGGGCGGCTGTTTCGAGACCAGCCACGCGACGACCCATGCCGAGCCGACCTACCTGGTGGACGGCATCGTCCACTATTGCGTGGCCAACATGCCCGGCGCGGTGGCGCGGACCAGCACCTATGCGCTGAACAATGTGACCCTGCCCCACGCGCTGCGCATTGCCGACCTCGGCTGGCGCGCAGCGCTGCGCGCCGATCCCCACCTTGCCGCCGGGCTGAACGTCCATGCCGGCAAGGTCACGTTCGAGGCCGTGGCGCGTGAACTGGGTTACGAATTCGTGTCTTCGGCTGAAATTCTTCGCTGA
PROTEIN sequence
Length: 134
VLVPGAAAPKLVTRDMLSTMKPGAVLVDVAIDQGGCFETSHATTHAEPTYLVDGIVHYCVANMPGAVARTSTYALNNVTLPHALRIADLGWRAALRADPHLAAGLNVHAGKVTFEAVARELGYEFVSSAEILR*