ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_25653_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 1717..3954

Top 3 Functional Annotations

Value Algorithm Source
signal peptide n=1 Tax=Schlesneria paludicola RepID=UPI00029A5F88 similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 740.0
  • Bit_score: 1219
  • Evalue 0.0
Membrane protein containing DUF1550 {ECO:0000313|EMBL:EMI27854.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.4
  • Coverage: 755.0
  • Bit_score: 359
  • Evalue 6.60e-96
signal peptide similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 753.0
  • Bit_score: 352
  • Evalue 2.80e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula europaea → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 2238
ATGACATTTTTAAGCATGATGTTCGTGTCCGCGCTACCGCTCGCAGCGGCTCCGATCGTCATTCATTTGCTGTTTCGTCGTCAGAAAAAAGTGATCCGCTGGGGAGCGATGCAGTTCTTGCTCGACGCCCAGCGTCGTCGTCGCCGTATTCCGAAAATCGACGACTGGTTTTTGATGCTCTTAAGATGTGCCGCACTGCTGTTTCTCGTGCTGGCATTGGCACGACCGATGGTGCGCGCGGCATGGGTCGGAAGTACTCCACAGCGTGATGTGATTCTTGTTCTTGACGTTTCCCTGACCATGAGTCGCGAGTCCAACGCGAAAACTCCTTTTGAGCGGATGAATCAGAAGCTGTCCGAAGTCGGCAAAGCTCTGAGTAGCACCGACGCAGTACACGTGGTCTTCGCGGCGAGCACTCCTCAGTGGCAAACAACAGAACAACTGGCGGGGAACTCTACGGCCTTCGCTCAGTTGTGTGAACGCATAAAAGGCCTGGGCCCGAGCCTGGGCCCGGCCGATCTGATGGCAACGATCGAACAGGCCCTGGCCGTTGAAGCCGGTCGAGGATCGCAATCACGAATCGTGACCGTCATCACGGATTGCCGTCAACATGGTTGGCCTGCAGATTGCCGTATTGCAGCAGCTCGCCTGCAACAGCAAATAACCGCACTAAAGTTTCCAACGGTCATCAATGTCGTCGACGTGGGCGACAACGCAGACCATGCCACCAATGTTGGACTCGAAAGCTTGGAAGCTGATCGTGTTCTCGCAGGAATCGGTGAAACCATCGAATTTCGAGCGAGCCTCAAGAATTATGGAATGAGTCGAGTTGATTCGTGTTCGTTGCAATGGAGCTGTGACGGCGATTCTTTCAATGTCTCCTTCGCTGATGCTCTCGATCCAGGACAAACAACCACGGTACAGATCCAGCATGCGTTCGATCACTCAGGCGAGTATTCGATCAATTGCCATGTCGACTACCGTGACGAACTGATGTTGGACAACGACGCAAAAGTCATTGTGGAAGTACGTGACAAGGTCCCTGTCTTAGTCGTCGGCCCTTCAGAACGCTCGGATCCGTTCTGGGATGAATCCCATTACATCATGGCGGCACTCGGACATCGACAACAGACGTCCGGCCCCAAACACGAAACCGTCTTCTTTGACGCGAAGCTTGTCGACATCACTGAACTTCAATCGACGGCGCTATCGAGTTATTCCGTCATCGTGTTCACGACAACACCGCCATTCACAGAAGTCCTCACCGAGCGATTGATTCATTTCGTCGCCAGCGGCGGTGGCCTTTGGCTTGCCCTCGGCATGGACTCAGATGCCGACACATTTAATAAGAACTTCGCTACGGGCGAGGAAACGTTCTCCCCCGTCGTAGTCGGCGGAGTCTTGGGAAAAGATGATCATGAAGAGACATTCGTTACCGTGCATCCCCCGGCGGTCACACATCCCGCGACGAACTTGCTGGGTGACACGGTCAGACTCGACATTCGCGATGCAAAGGTGTTCCGGCGATTCGATCTGAAGATCAATTCGGAAACCAAGCCGTCAATCCTGCTTGAAACTGGCGATGGACAAATCCTCGCAGTCGAACGCTTTCATCACGCGGGACGCGTGATCATTCAGTCCTTTCCACTCACACGATCCTGGAGCAACTTGACCCTGTGCAAGTTCTTCGTTCCCTACGTTCAAGAATGGCTTCGTTACCTCGCACAACCATCCGCAGTTTCCCGAAATCTTACGATGAACTCGCCCCTCATCCTGAAACAAGGGGTGTTAAAGGGGGAACGCGATTTGTCCGACAGCAAAGCCATGATCAAGGCGCCACTCCAGGAACCACTACCGACCATGCCCGAGGTCGAGGCTGAAGAATTGATCTATCGATATTTCGGTACCGCATTCCCCGGAGATTACGCCATGACGTTCGTTGGCGAGGATAACCGTATCGCGCGATTCTACGTCCGCCGAGATCCCGACGAATCAAGCCTCGCAGAGTTAACGGCAACACAGCGAAGAGAGTTGGATAGCGTCCCCAATTTGCAATTCGTCACCAACCCGATGGAATGGCCGTCCGCCGTCACAGTTGCTTCCAAGCAAACGCCCGTGTGGAGCTGGTTTTTGTTCGGATTGATCCTCTTGATCCTAACTGAACTACTTTCGGTCTGTTGGTTTGCCTGGCGCAAGCATTTGATTGCCGAGCTCCCGGCCGCCATCGTCAGTTCATGA
PROTEIN sequence
Length: 746
MTFLSMMFVSALPLAAAPIVIHLLFRRQKKVIRWGAMQFLLDAQRRRRRIPKIDDWFLMLLRCAALLFLVLALARPMVRAAWVGSTPQRDVILVLDVSLTMSRESNAKTPFERMNQKLSEVGKALSSTDAVHVVFAASTPQWQTTEQLAGNSTAFAQLCERIKGLGPSLGPADLMATIEQALAVEAGRGSQSRIVTVITDCRQHGWPADCRIAAARLQQQITALKFPTVINVVDVGDNADHATNVGLESLEADRVLAGIGETIEFRASLKNYGMSRVDSCSLQWSCDGDSFNVSFADALDPGQTTTVQIQHAFDHSGEYSINCHVDYRDELMLDNDAKVIVEVRDKVPVLVVGPSERSDPFWDESHYIMAALGHRQQTSGPKHETVFFDAKLVDITELQSTALSSYSVIVFTTTPPFTEVLTERLIHFVASGGGLWLALGMDSDADTFNKNFATGEETFSPVVVGGVLGKDDHEETFVTVHPPAVTHPATNLLGDTVRLDIRDAKVFRRFDLKINSETKPSILLETGDGQILAVERFHHAGRVIIQSFPLTRSWSNLTLCKFFVPYVQEWLRYLAQPSAVSRNLTMNSPLILKQGVLKGERDLSDSKAMIKAPLQEPLPTMPEVEAEELIYRYFGTAFPGDYAMTFVGEDNRIARFYVRRDPDESSLAELTATQRRELDSVPNLQFVTNPMEWPSAVTVASKQTPVWSWFLFGLILLILTELLSVCWFAWRKHLIAELPAAIVSS*