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scn_reactorb_scaffold_37505_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3..1385

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 461.0
  • Bit_score: 695
  • Evalue 6.30e-198
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 408.0
  • Bit_score: 695
  • Evalue 3.10e-197
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AXW0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 408.0
  • Bit_score: 695
  • Evalue 2.20e-197

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1383
AACTATGAGGACGCTATGCTTGTGTCTGAAGAGTTAGTAAGAGAAGATATATTCACTTCAGTTCATATAGAAGAATATGAAGCAGAAGCAAGAGATACAAAGCTTGGGCCGGAAGAGGTTACTAGAGATATACCGAATGTTGGTGATGATGCTCTTAAAGACCTTGATGAAAGAGGAATTATCAGAATAGGTGCAGAGGTTGTTGCTGGAGATATATTAGTTGGTAAGGTTACTCCAAAAGGAGAAACTGAATTGACTGCTGAAGAGAGACTTCTTCGTGCTATATTCGGAGAAAAAGCCAGAGAGGTTAGAGACACATCTCTTAAAGTTCCTCATGGTGAAACAGGTATTATAGTAGATGTTAAGGTATTTACCAGAGAAAATGGTGATGAATTAAGCCCAGGAGTTAGCAAGCTGGTTAGAGTTTATATTGCTACTAAAAGAAAGATAAATGTCGGAGACAAGATGTGCGGACGTCACGGAAACAAAGGTGTTATTTCCCACATCATGCCTGAAGAAGATATGCCATATCTTCCAGACGGTACTCCGCTTCAAGTTGTTCTTAACCCACTAGGCGTTCCTTCACGTATGAATATTGGCCAAGTATTAGAGGTCCATCTTGGACTTGCTGCTAAAAAGCTTGGCTGGCATGTTGCAACACCAGTGTTTGATGGTGCTTCAGAAGAAGACATCTTTGAAACCTTGGAGCTTGCGGGATACCCTAGAAGCGGTAAAATTAAACTAAGAGACGGTAGGTCTGGAGAGTATTTTAACGGTGATGTAACTGTTGGATATATGTATATGCTAAAGCTTCACCACCTTGTTGATGAAAAGATACATGCTCGTTCTACAGGACCTTACTCATTGGTAACTCAACAGCCGCTTGGCGGAAAAGCACAATTTGGAGGTCAGAGATTTGGTGAGATGGAGGTTTGGGCTTTAGAGGCATATGGTGCTGCTCATACTCTTCAAGAAATTCTTACTGTAAAATCAGATGACGTAACCGGAAGAGTAAAAACATATGAGGCTATAGTTAAGGGTGAGAATATACCTGAGCCGGGAGTTCCGGAATCATTTAAGGTTCTTATAAAAGAATTGCAAAGCTTGGCACTTGATGTAAGAATTATCAATAGCGATCAAAGCGAAATGGAAATTCTTGAAACTGTTGATGAAGATCATTCAGTTCTGCAAGAGAGCATGGAAGAGATAAGATATGAGGATGATCCTGACGGTATTGGCAGACTCTCAATTACGGACATAGACGACATCGATGACATTGATGATATCAGCGATATAGACGATGTAGAGGATGACGAATATGAAGATGAAGAAGATAGCTATAGTGCAGATATGGATTTAGTAATAGATGAGGAAGATTTTTAA
PROTEIN sequence
Length: 461
NYEDAMLVSEELVREDIFTSVHIEEYEAEARDTKLGPEEVTRDIPNVGDDALKDLDERGIIRIGAEVVAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKVPHGETGIIVDVKVFTRENGDELSPGVSKLVRVYIATKRKINVGDKMCGRHGNKGVISHIMPEEDMPYLPDGTPLQVVLNPLGVPSRMNIGQVLEVHLGLAAKKLGWHVATPVFDGASEEDIFETLELAGYPRSGKIKLRDGRSGEYFNGDVTVGYMYMLKLHHLVDEKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVTGRVKTYEAIVKGENIPEPGVPESFKVLIKELQSLALDVRIINSDQSEMEILETVDEDHSVLQESMEEIRYEDDPDGIGRLSITDIDDIDDIDDISDIDDVEDDEYEDEEDSYSADMDLVIDEEDF*