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scn_reactorb_scaffold_39885_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2947..4578)

Top 3 Functional Annotations

Value Algorithm Source
Type I restriction modification DNA specificity domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDP8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 484.0
  • Bit_score: 398
  • Evalue 6.70e-108
type I restriction-modification system similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 555.0
  • Bit_score: 412
  • Evalue 9.60e-113
Type I restriction-modification system {ECO:0000313|EMBL:AIN93894.1}; TaxID=221027 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema putidum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 555.0
  • Bit_score: 412
  • Evalue 4.80e-112

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Taxonomy

Treponema putidum → Treponema → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1632
GTGATTGATACAAAAGCATTAAGAGAAAAAATACTTGACCTTGCTATTCGTGGAAAACTTGTACCACAAGATCCTAACGATGAACCAGCATCTGTTCTTTTAGAACGCATTCGTGCTGAAAAGCAGCAGATGATTGAAGAGGGTAAACTTAAGGGAAAAGATATTAAAAACGATTCCATCATCTTTGTTGGTAAGGATAATTTACATTATGAGAAGTTTGTCGATGGAACGGTAAAATGTATTGAAGATGAGATACCTTTTGAGATTCCAGAAAGTAATTTACATTATGAGAAGTTTGTCGATGGAACGGTAAAATGTATTGAAGATGAGATACCTTTTGAGATTCCAGAAAGTTGGTGTTGGGTAAGATTGCCTTTCATTTCTGAAGAAATTTTTGCAGGTGGAGATAAACCTGAAATATATTCCAAATTTTTAACTGATAAATGTACAGTGCCCATTTATTCTAATGGAATTGAAAGTGATGGGTTATATGGATATACCGACATTGCCAAAGTTAATAAAGATAGCATAACTGTTTCTGCACGTGGCACAATTGGATTCTGTTGTGTTAGAAAAGAACCATTTGTACCAATCGTTCGTTTGATAACTATTATTCCAAATGATTTGGTGAGTATTGAATACTTGAATTTAACATTCAAAATTCTTGTAGAATGTGGTGTTGGTTCTAGTATTCCACAGTTGACAGTGCCTAACATAAAAACAAAACTTATTCCATTTCCACCATCAAATGAGCAAAATAGAATTTCAAAATTAGTATATGAAGCTGAACCAATTATACAATTTATAGAAAATAAAAAAGAAGAAATTAACAAAACCATTACTATAATTAAATCCAAAATCCTTGACCTAGCCATCAGGGGAAAACTTGTACCACAATACCCGAATGATGAGCCTGCTTCTGTACTTCTTGGACGCATCAGAGCAGAAAAAGAAGAACTAATAAAACAGGGAAAAATCAAACGTGACAATAAGGAGTCTATCATCTTCAAAGGTGATGATAACTCTTATTATGAAAAATTCATAGATAAATGTGAAAATATAGATAAAAAAATTATTTTTGATATTCCTAAAAATTGGACTTGGGTAAGATTAGGAAATTTAGCTCAATATAAAAAAGGACCATTTGGCAGCAGCATAACTAAATCAATGTTTGTTCCAGAATCTAAAGAAGTCATTAAAGTTTATGAACAAAAAAATGCTATACAAAAGAATGATACACTTGGCTCATACTATATTTCACAAGAAAAATATGATTCATTAAGAAGTTTTGAAGTATTTCCTAATGACATCATTGTAAGCTGTGCAGGAACAATAGGCGAATCCTATGTAATGCCAACAAGTATGCAGAAAGGAATAATTAACCAAGCTTTAATGAAGGTAACACTTTATGACTCCAATATTCTTGAATTTTATTTGTTGTATTTTGATTTCAAGCTTAAAGAATTTGCTAGAGAACAAGGTTATGGTGTTGCACTAAAAAATATTCCTCCATTTGATATATTAAAAGAATATTTATTACCTTTGCCACCTCTTTCTGAACAAAGCCGCATTATAGTTGCCGTTAAAAAGCTATTTGAACAACTTGATTTTATAACAAATTCCTTATCATAA
PROTEIN sequence
Length: 544
VIDTKALREKILDLAIRGKLVPQDPNDEPASVLLERIRAEKQQMIEEGKLKGKDIKNDSIIFVGKDNLHYEKFVDGTVKCIEDEIPFEIPESNLHYEKFVDGTVKCIEDEIPFEIPESWCWVRLPFISEEIFAGGDKPEIYSKFLTDKCTVPIYSNGIESDGLYGYTDIAKVNKDSITVSARGTIGFCCVRKEPFVPIVRLITIIPNDLVSIEYLNLTFKILVECGVGSSIPQLTVPNIKTKLIPFPPSNEQNRISKLVYEAEPIIQFIENKKEEINKTITIIKSKILDLAIRGKLVPQYPNDEPASVLLGRIRAEKEELIKQGKIKRDNKESIIFKGDDNSYYEKFIDKCENIDKKIIFDIPKNWTWVRLGNLAQYKKGPFGSSITKSMFVPESKEVIKVYEQKNAIQKNDTLGSYYISQEKYDSLRSFEVFPNDIIVSCAGTIGESYVMPTSMQKGIINQALMKVTLYDSNILEFYLLYFDFKLKEFAREQGYGVALKNIPPFDILKEYLLPLPPLSEQSRIIVAVKKLFEQLDFITNSLS*